Information for 17-ACTTTAAAAAGTA (Motif 34)

G T C A G A T C A C G T A C G T A C G T G C T A C G T A C G T A C T G A G T C A T C A G C G A T C G T A
Reverse Opposite:
A C G T G C T A A G T C A C G T A G C T A C G T C G A T C G A T C G T A C G T A C G T A C A T G A C G T
p-value:1e-6
log p-value:-1.439e+01
Information Content per bp:1.789
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 25.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACTTTAAAAAGTA
GNCTATAAAAGG--
 A C G T G T C A G A T C A C G T A C G T A C G T G C T A C G T A C G T A C T G A G T C A T C A G C G A T C G T A
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACTTTAAAAAGTA
--TTTGAAACCG-
 G T C A G A T C A C G T A C G T A C G T G C T A C G T A C G T A C T G A G T C A T C A G C G A T C G T A
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACTTTAAAAAGTA
NATTCAAAT----
 G T C A G A T C A C G T A C G T A C G T G C T A C G T A C G T A C T G A G T C A T C A G C G A T C G T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACTTTAAAAAGTA
TACTGGAAAAAAAA
 A C G T G T C A G A T C A C G T A C G T A C G T G C T A C G T A C G T A C T G A G T C A T C A G C G A T C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACTTTAAAAAGTA-----
-GTTAAAAAAAAAAATTA
 G T C A G A T C A C G T A C G T A C G T G C T A C G T A C G T A C T G A G T C A T C A G C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACTTTAAAAAGTA---
-GTATAAAAGGCGGGG
 G T C A G A T C A C G T A C G T A C G T G C T A C G T A C G T A C T G A G T C A T C A G C G A T C G T A A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACTTTAAAAAGTA---
-GTATAAAAGGCGGGG
 G T C A G A T C A C G T A C G T A C G T G C T A C G T A C G T A C T G A G T C A T C A G C G A T C G T A A C G T A C G T A C G T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACTTTAAAAAGTA
CCAATAAAAA---
 G T C A G A T C A C G T A C G T A C G T G C T A C G T A C G T A C T G A G T C A T C A G C G A T C G T A
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ACTTTAAAAAGTA
NGCAATTAAA----
 A C G T G T C A G A T C A C G T A C G T A C G T G C T A C G T A C G T A C T G A G T C A T C A G C G A T C G T A
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACTTTAAAAAGTA
--TTTTATTRGN-
 G T C A G A T C A C G T A C G T A C G T G C T A C G T A C G T A C T G A G T C A T C A G C G A T C G T A
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T