Information for 12-AGAGSAYGCASAR (Motif 30)

C G T A A T C G C G T A A C T G A T G C C G T A A G T C C T A G A G T C C G T A A T C G C G T A C T G A
Reverse Opposite:
A G C T A C G T A T G C A C G T A C T G A G T C C T A G A C G T A T C G A G T C A C G T A T G C A C G T
p-value:1e-8
log p-value:-1.889e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 16.9bp
Average Position of motif in Background47.8 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGAGSAYGCASAR
-GCGCATGCGCAG
 C G T A A T C G C G T A A C T G A T G C C G T A A G T C C T A G A G T C C G T A A T C G C G T A C T G A
A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGAGSAYGCASAR
----CACGCA---
 C G T A A T C G C G T A A C T G A T G C C G T A A G T C C T A G A G T C C G T A A T C G C G T A C T G A
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGAGSAYGCASAR
-GCGCATGCGCAC
 C G T A A T C G C G T A A C T G A T G C C G T A A G T C C T A G A G T C C G T A A T C G C G T A C T G A
A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAGSAYGCASAR
-TBGCACGCAA--
 C G T A A T C G C G T A A C T G A T G C C G T A A G T C C T A G A G T C C G T A A T C G C G T A C T G A
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGAGSAYGCASAR-
--AGGAAACAGCTG
 C G T A A T C G C G T A A C T G A T G C C G T A A G T C C T A G A G T C C G T A A T C G C G T A C T G A A C G T
A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

SPIC/MA0687.1/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----AGAGSAYGCASAR
AAAAAGAGGAAGTA---
 A C G T A C G T A C G T A C G T C G T A A T C G C G T A A C T G A T G C C G T A A G T C C T A G A G T C C G T A A T C G C G T A C T G A
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGAGSAYGCASAR
GGACCACCCACG-
 C G T A A T C G C G T A A C T G A T G C C G T A A G T C C T A G A G T C C G T A A T C G C G T A C T G A
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGAGSAYGCASAR
GGGAGGACNG----
 A C G T C G T A A T C G C G T A A C T G A T G C C G T A A G T C C T A G A G T C C G T A A T C G C G T A C T G A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGAGSAYGCASAR
AACAGGAAGT----
 A C G T C G T A A T C G C G T A A C T G A T G C C G T A A G T C C T A G A G T C C G T A A T C G C G T A C T G A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----AGAGSAYGCASAR
NNNVCTGWGYAAACASN-
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G C G T A A C T G A T G C C G T A A G T C C T A G A G T C C G T A A T C G C G T A C T G A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T