Information for 3-ATATGTMAAGCCTGCC (Motif 3)

G C T A A G C T C G T A C A G T C T A G C G A T G T C A G T C A C G T A C T A G A G T C G T A C G C A T C A T G G T A C G A T C
Reverse Opposite:
C T A G C A T G G T A C C G T A A C T G T C A G G A T C G A C T C A G T A C G T G C T A A G T C G C T A G C A T C T G A C A G T
p-value:1e-14
log p-value:-3.302e+01
Information Content per bp:1.573
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif61.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets51.7 +/- 26.9bp
Average Position of motif in Background53.9 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F1/MA0785.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATATGTMAAGCCTGCC
AATATGCAAATT-----
 A C G T G C T A A G C T C G T A C A G T C T A G C G A T G T C A G T C A C G T A C T A G A G T C G T A C G C A T C A T G G T A C G A T C
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATATGTMAAGCCTGCC
ACCATATGTT---------
 A C G T A C G T A C G T G C T A A G C T C G T A C A G T C T A G C G A T G T C A G T C A C G T A C T A G A G T C G T A C G C A T C A T G G T A C G A T C
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATATGTMAAGCCTGCC
-TATGCWAATBAV---
 G C T A A G C T C G T A C A G T C T A G C G A T G T C A G T C A C G T A C T A G A G T C G T A C G C A T C A T G G T A C G A T C
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATATGTMAAGCCTGCC
-TATGCAAAT------
 G C T A A G C T C G T A C A G T C T A G C G A T G T C A G T C A C G T A C T A G A G T C G T A C G C A T C A T G G T A C G A T C
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATATGTMAAGCCTGCC
CCATATGT----------
 A C G T A C G T G C T A A G C T C G T A C A G T C T A G C G A T G T C A G T C A C G T A C T A G A G T C G T A C G C A T C A T G G T A C G A T C
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ATATGTMAAGCCTGCC
AATATACATGTAAAACA----
 A C G T A C G T A C G T A C G T A C G T G C T A A G C T C G T A C A G T C T A G C G A T G T C A G T C A C G T A C T A G A G T C G T A C G C A T C A T G G T A C G A T C
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATATGTMAAGCCTGCC
ATATGCAAAT------
 G C T A A G C T C G T A C A G T C T A G C G A T G T C A G T C A C G T A C T A G A G T C G T A C G C A T C A T G G T A C G A T C
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATATGTMAAGCCTGCC
TTATGCAAAT------
 G C T A A G C T C G T A C A G T C T A G C G A T G T C A G T C A C G T A C T A G A G T C G T A C G C A T C A T G G T A C G A T C
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATATGTMAAGCCTGCC
TTATGCAAATTA----
 G C T A A G C T C G T A C A G T C T A G C G A T G T C A G T C A C G T A C T A G A G T C G T A C G C A T C A T G G T A C G A T C
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATATGTMAAGCCTGCC
-TATGCAAAT------
 G C T A A G C T C G T A C A G T C T A G C G A T G T C A G T C A C G T A C T A G A G T C G T A C G C A T C A T G G T A C G A T C
A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T