p-value: | 1e-8 |
log p-value: | -2.032e+01 |
Information Content per bp: | 1.763 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.68% |
Number of Background Sequences with motif | 3.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 44.0 +/- 21.4bp |
Average Position of motif in Background | 58.6 +/- 19.4bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
Match Rank: | 1 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTHAGGGCTVAGGADA --TAGGGCAAAGGTCA |
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PB0057.1_Rxra_1/Jaspar
Match Rank: | 2 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTHAGGGCTVAGGADA NTNNNGGGGTCANGNNN |
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THAP1/MA0597.1/Jaspar
Match Rank: | 3 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTHAGGGCTVAGGADA -TNNGGGCAG------ |
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RHOXF1/MA0719.1/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TTHAGGGCTVAGGADA ----NGGATTAN---- |
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ELF1/MA0473.2/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTHAGGGCTVAGGADA NACTTCCGGGTT------- |
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PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer
Match Rank: | 6 |
Score: | 0.51 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTHAGGGCTVAGGADA --TGGGGCAAAGGTCA |
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PB0118.1_Esrra_2/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTHAGGGCTVAGGADA GGCGAGGGGTCAAGGGC |
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PB0030.1_Hnf4a_1/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TTHAGGGCTVAGGADA CTCCAGGGGTCAATTGA |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TTHAGGGCTVAGGADA -----NGCTN------ |
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ELF4/MA0641.1/Jaspar
Match Rank: | 10 |
Score: | 0.50 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTHAGGGCTVAGGADA CACTTCCGGGTT------- |
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