Information for 10-GTARAAAGCC (Motif 25)

A C T G G C A T C G T A C T A G C G T A C G T A C T G A A C T G G T A C A G T C
Reverse Opposite:
C T A G A C T G A G T C A G C T A C G T A C G T G A T C A C G T C G T A G T A C
p-value:1e-8
log p-value:-2.050e+01
Information Content per bp:1.786
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif236.9
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets54.8 +/- 23.6bp
Average Position of motif in Background49.2 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTARAAAGCC
GGAACAAAGR-
 A C G T A C T G G C A T C G T A C T A G C G T A C G T A C T G A A C T G G T A C A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTARAAAGCC
--ACAAAG--
 A C T G G C A T C G T A C T A G C G T A C G T A C T G A A C T G G T A C A G T C
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTARAAAGCC
VRRACAAWGG-
 A C G T A C T G G C A T C G T A C T A G C G T A C G T A C T G A A C T G G T A C A G T C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTARAAAGCC----
--ACAAAGGNBCCT
 A C T G G C A T C G T A C T A G C G T A C G T A C T G A A C T G G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTARAAAGCC
AAAACAAAGG-
 A C G T A C T G G C A T C G T A C T A G C G T A C G T A C T G A A C T G G T A C A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTARAAAGCC---
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C T G G C A T C G T A C T A G C G T A C G T A C T G A A C T G G T A C A G T C A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GTARAAAGCC
TACTGGAAAAAAAA-
 A C G T A C G T A C G T A C G T A C G T A C T G G C A T C G T A C T A G C G T A C G T A C T G A A C T G G T A C A G T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTARAAAGCC---
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C T G G C A T C G T A C T A G C G T A C G T A C T G A A C T G G T A C A G T C A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTARAAAGCC----
GGAGAAAGGTGCGA
 A C T G G C A T C G T A C T A G C G T A C G T A C T G A A C T G G T A C A G T C A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTARAAAGCC
-RACAAWGG-
 A C T G G C A T C G T A C T A G C G T A C G T A C T G A A C T G G T A C A G T C
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T