Information for 4-TGCTAGAATTAAGAAT (Motif 3)

C A G T A T C G A G T C A C G T C T G A A T C G C G T A G C T A G C A T C G A T C T G A C T G A A C T G C G T A C G T A C G A T
Reverse Opposite:
G C T A G A C T A C G T A G T C A G C T A G C T C G T A C G T A C G A T C G A T T A G C G A C T C G T A A C T G T A G C G T C A
p-value:1e-17
log p-value:-4.034e+01
Information Content per bp:1.718
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.7 +/- 20.4bp
Average Position of motif in Background43.2 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.3/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGCTAGAATTAAGAAT
-TCTAAAAATAGA---
 C A G T A T C G A G T C A C G T C T G A A T C G C G T A G C T A G C A T C G A T C T G A C T G A A C T G C G T A C G T A C G A T
A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGCTAGAATTAAGAAT----
------AAATAAGAAAAAAC
 C A G T A T C G A G T C A C G T C T G A A T C G C G T A G C T A G C A T C G A T C T G A C T G A A C T G C G T A C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGCTAGAATTAAGAAT---
NNCCTGNAAAAAAAAAAAAA
 A C G T C A G T A T C G A G T C A C G T C T G A A T C G C G T A G C T A G C A T C G A T C T G A C T G A A C T G C G T A C G T A C G A T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGCTAGAATTAAGAAT
-GCTATAAATAGC---
 C A G T A T C G A G T C A C G T C T G A A T C G C G T A G C T A G C A T C G A T C T G A C T G A A C T G C G T A C G T A C G A T
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGCTAGAATTAAGAAT---
NNCCTGNAAAAAAAAAAAAA
 A C G T C A G T A T C G A G T C A C G T C T G A A T C G C G T A G C T A G C A T C G A T C T G A C T G A A C T G C G T A C G T A C G A T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCTAGAATTAAGAAT
-GCTAAAAATAGC---
 C A G T A T C G A G T C A C G T C T G A A T C G C G T A G C T A G C A T C G A T C T G A C T G A A C T G C G T A C G T A C G A T
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGCTAGAATTAAGAAT
-ACTATAAATAGA---
 C A G T A T C G A G T C A C G T C T G A A T C G C G T A G C T A G C A T C G A T C T G A C T G A A C T G C G T A C G T A C G A T
A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGCTAGAATTAAGAAT--
---AACAAACAACAAGAG
 C A G T A T C G A G T C A C G T C T G A A T C G C G T A G C T A G C A T C G A T C T G A C T G A A C T G C G T A C G T A C G A T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0021.1_Gata3_1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGCTAGAATTAAGAAT-----
TTTTTAGAGATAAGAAATAAAG
 A C G T C A G T A T C G A G T C A C G T C T G A A T C G C G T A G C T A G C A T C G A T C T G A C T G A A C T G C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGCTAGAATTAAGAAT
ATGCTAAAAATAGAA--
 A C G T C A G T A T C G A G T C A C G T C T G A A T C G C G T A G C T A G C A T C G A T C T G A C T G A A C T G C G T A C G T A C G A T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T