Information for 12-TTSATGAAKC (Motif 29)

A C G T A C G T A T C G G T C A A C G T A C T G C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G G T C A A C G T A C G T A G T C C G T A A C G T A T G C C G T A C G T A
p-value:1e-6
log p-value:-1.442e+01
Information Content per bp:1.904
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif29.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.3 +/- 21.6bp
Average Position of motif in Background50.6 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTSATGAAKC-
NNTNTCATGAATGT
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A A C G T A C T G C G T A C G T A A C G T A G T C A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTSATGAAKC-----
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A T C G G T C A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTSATGAAKC-
-TCATCAATCA
 A C G T A C G T A T C G G T C A A C G T A C T G C G T A C G T A A C G T A G T C A C G T
A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TTSATGAAKC-
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A C G T A C T G C G T A C G T A A C G T A G T C A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PB0142.1_Jundm2_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTSATGAAKC-----
ATTGATGAGTCACCAA
 A C G T A C G T A C G T A T C G G T C A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T G C A C A G T A C G T C T A G T C G A A G C T A C T G G T C A A T C G G A C T T G A C C T G A A G T C G T A C C T G A G T C A

PH0150.1_Pou4f3/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TTSATGAAKC-
AGTTATTAATGAGGTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A C G T A C T G C G T A C G T A A C G T A G T C A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

FOS/MA0476.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTSATGAAKC---
--NATGAGTCANN
 A C G T A C G T A T C G G T C A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

JUND/MA0491.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTSATGAAKC---
--NATGAGTCACN
 A C G T A C G T A T C G G T C A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

PH0016.1_Cux1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTSATGAAKC---
TNAGNTGATCAACCGGT
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A C G T
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

PB0001.1_Arid3a_1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTSATGAAKC--
NNNTTTTAATTAANNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C