p-value: | 1e-8 |
log p-value: | -1.979e+01 |
Information Content per bp: | 1.933 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.52% |
Number of Background Sequences with motif | 0.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 53.2 +/- 23.3bp |
Average Position of motif in Background | 23.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0004.1_Nkx3-2/Jaspar
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTTAGTGGTTCTG NTNNTTAAGTGGTTANN |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTTAGTGGTTCTG NTNNTTAAGTGGNTNAN |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTTAGTGGTTCTG AATNTTAAGTGGNTNN- |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTTAGTGGTTCTG TTAAGTGCTT--- |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTTAGTGGTTCTG TTRAGTGSYK--- |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTTAGTGGTTCTG TTAAGTGGT---- |
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PH0114.1_Nkx2-5/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTTAGTGGTTCTG AAATTCAAGTGGNTTN- |
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RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTTAGTGGTTCTG -NNTGTGGTTT-- |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTAGTGGTTCTG CTTGAGTGGCT--- |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTTAGTGGTTCTG TTGAGTGSTT--- |
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