Information for 16-TGCACTATGCCAG (Motif 21)

A C G T A T C G G T A C C G T A A G T C A C G T C T G A A C G T A C T G A T G C A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G A T C G A G T C G T C A A G C T C G T A C T A G C G A T A C T G A T G C C G T A
p-value:1e-9
log p-value:-2.190e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.3 +/- 10.7bp
Average Position of motif in Background45.2 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:forward strand
Alignment:TGCACTATGCCAG--
------ATGCCAACC
 A C G T A T C G G T A C C G T A A G T C A C G T C T G A A C G T A C T G A T G C A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGCACTATGCCAG------
---ACTATGCCAACCTACC
 A C G T A T C G G T A C C G T A A G T C A C G T C T G A A C G T A C T G A T G C A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TGCACTATGCCAG---
------ATGCCAGACN
 A C G T A T C G G T A C C G T A A G T C A C G T C T G A A C G T A C T G A T G C A G T C C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:TGCACTATGCCAG
-------TGCCAA
 A C G T A T C G G T A C C G T A A G T C A C G T C T G A A C G T A C T G A T G C A G T C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TGCACTATGCCAG-
-----CGTGCCAAG
 A C G T A T C G G T A C C G T A A G T C A C G T C T G A A C G T A C T G A T G C A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGCACTATGCCAG
--AAYTAGGTCA-
 A C G T A T C G G T A C C G T A A G T C A C G T C T G A A C G T A C T G A T G C A G T C C G T A A T C G
A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGCACTATGCCAG
----CTAGGCCT-
 A C G T A T C G G T A C C G T A A G T C A C G T C T G A A C G T A C T G A T G C A G T C C G T A A T C G
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGCACTATGCCAG
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A C G T A T C G G T A C C G T A A G T C A C G T C T G A A C G T A C T G A T G C A G T C C G T A A T C G
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGCACTATGCCAG
TGGCACCATGCCAA
 A C G T A C G T A T C G G T A C C G T A A G T C A C G T C T G A A C G T A C T G A T G C A G T C C G T A A T C G
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGCACTATGCCAG--
------ATGCCCACC
 A C G T A T C G G T A C C G T A A G T C A C G T C T G A A C G T A C T G A T G C A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C