Information for 8-TATTGAAGDGAGAAAA (Motif 11)

A G C T C G T A A G C T A C G T A T C G C G T A C T G A A C T G C A T G A C T G C G T A C T A G C G T A C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G A T A G T C A C G T A G T C G T A C A G T C A G C T C G A T A T G C C G T A C T G A A C G T C T G A
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.809
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 29.8bp
Average Position of motif in Background50.1 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:1
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------TATTGAAGDGAGAAAA
NGTGTTCAVTSAAGCGKAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G C T A C G T A T C G C G T A C T G A A C T G C A T G A C T G C G T A C T A G C G T A C G T A G T C A C G T A
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TATTGAAGDGAGAAAA
AANTCATGCGTGAA--
 A G C T C G T A A G C T A C G T A T C G C G T A C T G A A C T G C A T G A C T G C G T A C T A G C G T A C G T A G T C A C G T A
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TATTGAAGDGAGAAAA
NNNTATTGAATTGNNN---
 A C G T A C G T A C G T A G C T C G T A A G C T A C G T A T C G C G T A C T G A A C T G C A T G A C T G C G T A C T A G C G T A C G T A G T C A C G T A
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TATTGAAGDGAGAAAA--
----TACTGGAAAAAAAA
 A G C T C G T A A G C T A C G T A T C G C G T A C T G A A C T G C A T G A C T G C G T A C T A G C G T A C G T A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TATTGAAGDGAGAAAA
--NTCAAGTGG-----
 A G C T C G T A A G C T A C G T A T C G C G T A C T G A A C T G C A T G A C T G C G T A C T A G C G T A C G T A G T C A C G T A
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TATTGAAGDGAGAAAA---
--TTAGAGGGATTAACAAT
 A G C T C G T A A G C T A C G T A T C G C G T A C T G A A C T G C A T G A C T G C G T A C T A G C G T A C G T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0124.1_Obox5_1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TATTGAAGDGAGAAAA----
---TAGAGGGATTAAATTTC
 A G C T C G T A A G C T A C G T A T C G C G T A C T G A A C T G C A T G A C T G C G T A C T A G C G T A C G T A G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TATTGAAGDGAGAAAA-------
-TTTTTAGAGATAAGAAATAAAG
 A G C T C G T A A G C T A C G T A T C G C G T A C T G A A C T G C A T G A C T G C G T A C T A G C G T A C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TATTGAAGDGAGAAAA---
NNCCTGNAAAAAAAAAAAAA
 A C G T A G C T C G T A A G C T A C G T A T C G C G T A C T G A A C T G C A T G A C T G C G T A C T A G C G T A C G T A G T C A C G T A A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TATTGAAGDGAGAAAA---
NNCCTGNAAAAAAAAAAAAA
 A C G T A G C T C G T A A G C T A C G T A T C G C G T A C T G A A C T G C A T G A C T G C G T A C T A G C G T A C G T A G T C A C G T A A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A