Information for 7-GGTGGCARTGTTMWGG (Motif 10)

C A T G A T C G C G A T A T C G A T C G G A T C C G T A T C A G C A G T C A T G C G A T C A G T G T A C G C A T T C A G T A C G
Reverse Opposite:
A T G C A G T C C G T A A C T G G C T A C G T A G T A C G T C A A G T C C G A T C T A G A T G C A T G C C G T A T A G C G T A C
p-value:1e-12
log p-value:-2.903e+01
Information Content per bp:1.602
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif76.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets38.6 +/- 23.1bp
Average Position of motif in Background48.6 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGTGGCARTGTTMWGG----
---NNCTTTGTTTTGNTNNN
 C A T G A T C G C G A T A T C G A T C G G A T C C G T A T C A G C A G T C A T G C G A T C A G T G T A C G C A T T C A G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTGGCARTGTTMWGG
CCTTGCAATTTTTNN-
 C A T G A T C G C G A T A T C G A T C G G A T C C G T A T C A G C A G T C A T G C G A T C A G T G T A C G C A T T C A G T A C G
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCARTGTTMWGG
TNNNNGGTGTCATNTNT----
 A C G T A C G T A C G T A C G T A C G T C A T G A T C G C G A T A T C G A T C G G A T C C G T A T C A G C A G T C A T G C G A T C A G T G T A C G C A T T C A G T A C G
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCARTGTTMWGG
GGTTGGCAT--------
 A C G T C A T G A T C G C G A T A T C G A T C G G A T C C G T A T C A G C A G T C A T G C G A T C A G T G T A C G C A T T C A G T A C G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GGTGGCARTGTTMWGG
------ATTGTTA---
 C A T G A T C G C G A T A T C G A T C G G A T C C G T A T C A G C A G T C A T G C G A T C A G T G T A C G C A T T C A G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGTGGCARTGTTMWGG
----CCATTGTTYB--
 C A T G A T C G C G A T A T C G A T C G G A T C C G T A T C A G C A G T C A T G C G A T C A G T G T A C G C A T T C A G T A C G
A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGTGGCARTGTTMWGG
NNTNNCAATATTAG--
 C A T G A T C G C G A T A T C G A T C G G A T C C G T A T C A G C A G T C A T G C G A T C A G T G T A C G C A T T C A G T A C G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGTGGCARTGTTMWGG
NNTNNCAATATTAG--
 C A T G A T C G C G A T A T C G A T C G G A T C C G T A T C A G C A G T C A T G C G A T C A G T G T A C G C A T T C A G T A C G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGTGGCARTGTTMWGG
---NCCATTGTTC---
 C A T G A T C G C G A T A T C G A T C G G A T C C G T A T C A G C A G T C A T G C G A T C A G T G T A C G C A T T C A G T A C G
A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGTGGCARTGTTMWGG
----CCATTGTTC---
 C A T G A T C G C G A T A T C G A T C G G A T C C G T A T C A G C A G T C A T G C G A T C A G T G T A C G C A T T C A G T A C G
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T