p-value: | 1e-11 |
log p-value: | -2.598e+01 |
Information Content per bp: | 1.727 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.70% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 30.4 +/- 11.8bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTTTACCATCAGTAAC-- --TGACCTNTAGTAACCC |
|
|
|
Nr1h3::Rxra/MA0494.1/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTTTACCATCAGTAAC----- --TGACCTAAAGTAACCTCTG |
|
|
|
HOXC12/MA0906.1/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTTACCATCAGTAAC NTTTTACGACC------ |
|
|
|
HOXC11/MA0651.1/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTTACCATCAGTAAC NTTTTACGACC------ |
|
|
|
Hoxa11/MA0911.1/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTTACCATCAGTAAC ANTTTTACGACC------ |
|
|
|
HOXD12/MA0873.1/Jaspar
Match Rank: | 6 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTTACCATCAGTAAC NTTTTACGACT------ |
|
|
|
HOXD11/MA0908.1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTTTACCATCAGTAAC NTTTTACGAC------- |
|
|
|
SA0002.1_at_AC_acceptor/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TTTTACCATCAGTAAC TTTTTTTTTTTTTTCAGGTT- |
|
|
|
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTTTACCATCAGTAAC---- TTTMCGCTTSABTGAACACN |
|
|
|
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TTTTACCATCAGTAAC NAGTTTCABTHTGACTNW- |
|
|
|