Information for 15-AAAGTTTTCT (Motif 47)

C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A C G T A G T C A G T A C A C G T A C G T A C G T
p-value:1e-3
log p-value:-7.368e+00
Information Content per bp:1.956
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif90.4
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets41.2 +/- 25.9bp
Average Position of motif in Background47.8 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAAGTTTTCT
-AAGCTTG--
 C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAAGTTTTCT------
NNANTTTTATTGGNNN
 C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTTTTCT------
NTNAATTTTATTGNATT
 A C G T C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTTTCT-
GAATGTTTGTTT
 A C G T C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AAAGTTTTCT-
----TTTTCCA
 C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAAGTTTTCT---
---ATTTTCCATT
 C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAAGTTTTCT---
AANTTATTGTTCTNNA
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AAAGTTTTCT---
---NTTTTATTGG
 C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AAAGTTTTCT--
--TGGTTTCAGT
 C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AAAGTTTTCT---
---NTTTTATGAC
 C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C