Information for 25-GCTCACCCAGCAVCAG (Motif 37)

C T A G G A T C G A C T G T A C C T G A A T G C G T A C A G T C C G T A C T A G A G T C C G T A T G A C A T G C C G T A A T C G
Reverse Opposite:
A T G C G A C T A T C G A C T G C G A T A C T G A G T C G A C T A C T G A C T G A T C G A G C T A C T G C T G A C T A G A G T C
p-value:1e-7
log p-value:-1.820e+01
Information Content per bp:1.688
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif26.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.8 +/- 15.2bp
Average Position of motif in Background47.4 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCTCACCCAGCAVCAG
ANNTNCCCACCCANNAC---
 A C G T A C G T A C G T A C G T C T A G G A T C G A C T G T A C C T G A A T G C G T A C A G T C C G T A C T A G A G T C C G T A T G A C A T G C C G T A A T C G
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCTCACCCAGCAVCAG
----SCCTAGCAACAG
 C T A G G A T C G A C T G T A C C T G A A T G C G T A C A G T C C G T A C T A G A G T C C G T A T G A C A T G C C G T A A T C G
A C G T A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTCACCCAGCAVCAG-
--CCGCATAGCAACGGA
 C T A G G A T C G A C T G T A C C T G A A T G C G T A C A G T C C G T A C T A G A G T C C G T A T G A C A T G C C G T A A T C G A C G T
A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTCACCCAGCAVCAG
GCTGASTCAGCA----
 C T A G G A T C G A C T G T A C C T G A A T G C G T A C A G T C C G T A C T A G A G T C C G T A T G A C A T G C C G T A A T C G
T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCTCACCCAGCAVCAG
GGCCACACCCAN------
 A C G T A C G T C T A G G A T C G A C T G T A C C T G A A T G C G T A C A G T C C G T A C T A G A G T C C G T A T G A C A T G C C G T A A T C G
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCTCACCCAGCAVCAG
GGACCACCCACG-----
 A C G T C T A G G A T C G A C T G T A C C T G A A T G C G T A C A G T C C G T A C T A G A G T C C G T A T G A C A T G C C G T A A T C G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCTCACCCAGCAVCAG
GGCCACACCCA-------
 A C G T A C G T C T A G G A T C G A C T G T A C C T G A A T G C G T A C A G T C C G T A C T A G A G T C C G T A T G A C A T G C C G T A A T C G
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCTCACCCAGCAVCAG
GCCACACCCA-------
 A C G T C T A G G A T C G A C T G T A C C T G A A T G C G T A C A G T C C G T A C T A G A G T C C G T A T G A C A T G C C G T A A T C G
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCTCACCCAGCAVCAG-
--CCACACAGCAGGAGA
 C T A G G A T C G A C T G T A C C T G A A T G C G T A C A G T C C G T A C T A G A G T C C G T A T G A C A T G C C G T A A T C G A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:10
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------GCTCACCCAGCAVCAG
RAAWNTGCTGASTCAGCANW--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G G A T C G A C T G T A C C T G A A T G C G T A C A G T C C G T A C T A G A G T C C G T A T G A C A T G C C G T A A T C G
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T A C G T A C G T