Information for 20-YSYCTWGCYRMRAGGG (Motif 31)

A G T C A T C G A G C T A G T C A C G T C G A T A C T G A G T C A G C T C T A G G T C A C T G A C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A G C T A C G T A G T C C T A G A C T G A G T C C G T A C G T A A C T G C T A G A T G C C T A G
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.818
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.4 +/- 27.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:YSYCTWGCYRMRAGGG--
-----TGCCCTNAGGGCA
 A G T C A T C G A G C T A G T C A C G T C G A T A C T G A G T C A G C T C T A G G T C A C T G A C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:YSYCTWGCYRMRAGGG--
-----TGCCCTNAGGGCA
 A G T C A T C G A G C T A G T C A C G T C G A T A C T G A G T C A G C T C T A G G T C A C T G A C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:YSYCTWGCYRMRAGGG--
-----TGCCCTGAGGGCA
 A G T C A T C G A G C T A G T C A C G T C G A T A C T G A G T C A G C T C T A G G T C A C T G A C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:YSYCTWGCYRMRAGGG
TNTCCTGCTGTGNNG-
 A G T C A T C G A G C T A G T C A C G T C G A T A C T G A G T C A G C T C T A G G T C A C T G A C G T A A C T G A C T G A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:YSYCTWGCYRMRAGGG
TCNCCTGCTGNGNNN-
 A G T C A T C G A G C T A G T C A C G T C G A T A C T G A G T C A G C T C T A G G T C A C T G A C G T A A C T G A C T G A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:YSYCTWGCYRMRAGGG-
-----TGCCCNGGGGCA
 A G T C A T C G A G C T A G T C A C G T C G A T A C T G A G T C A G C T C T A G G T C A C T G A C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:YSYCTWGCYRMRAGGG--
----TTGCCCTAGGGCAT
 A G T C A T C G A G C T A G T C A C G T C G A T A C T G A G T C A G C T C T A G G T C A C T G A C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:YSYCTWGCYRMRAGGG-
-----TGCCCTNGGGCA
 A G T C A T C G A G C T A G T C A C G T C G A T A C T G A G T C A G C T C T A G G T C A C T G A C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.48
Offset:3
Orientation:forward strand
Alignment:YSYCTWGCYRMRAGGG--
---GTAGGGCAAAGGTCA
 A G T C A T C G A G C T A G T C A C G T C G A T A C T G A G T C A G C T C T A G G T C A C T G A C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:YSYCTWGCYRMRAGGG-------
----TGGCCACCAGGGGGCGCTA
 A G T C A T C G A G C T A G T C A C G T C G A T A C T G A G T C A G C T C T A G G T C A C T G A C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A