Information for 13-YCASCATTCTTTTAAA (Motif 11)

A G C T A G T C C G T A A T G C A G T C C G T A A C G T G A C T A G T C A C G T A C G T A G C T C G A T C T G A G T C A C G T A
Reverse Opposite:
A C G T A C G T A G C T G C T A C T G A C G T A C G T A A C T G C T G A C G T A A C G T A C T G A T C G C G A T A C T G C T G A
p-value:1e-11
log p-value:-2.741e+01
Information Content per bp:1.824
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 20.2bp
Average Position of motif in Background72.1 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0067.1_Sox18_1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YCASCATTCTTTTAAA-
-TTCAATTGTTCTAAAA
 A G C T A G T C C G T A A T G C A G T C C G T A A C G T G A C T A G T C A C G T A C G T A G C T C G A T C T G A G T C A C G T A A C G T
A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:YCASCATTCTTTTAAA---
---------TTTGAAACCG
 A G C T A G T C C G T A A T G C A G T C C G T A A C G T G A C T A G T C A C G T A C G T A G C T C G A T C T G A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.56
Offset:7
Orientation:forward strand
Alignment:YCASCATTCTTTTAAA---
-------CCTTTTATAGNC
 A G C T A G T C C G T A A T G C A G T C C G T A A C G T G A C T A G T C A C G T A C G T A G C T C G A T C T G A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:YCASCATTCTTTTAAA--
--NNCATTCATTCATNNN
 A G C T A G T C C G T A A T G C A G T C C G T A A C G T G A C T A G T C A C G T A C G T A G C T C G A T C T G A G T C A C G T A A C G T A C G T
A C G T A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:YCASCATTCTTTTAAA
---CCATTGTTYB---
 A G C T A G T C C G T A A T G C A G T C C G T A A C G T G A C T A G T C A C G T A C G T A G C T C G A T C T G A G T C A C G T A
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---YCASCATTCTTTTAAA
AAGTCAGCANTTTTN----
 A C G T A C G T A C G T A G C T A G T C C G T A A T G C A G T C C G T A A C G T G A C T A G T C A C G T A C G T A G C T C G A T C T G A G T C A C G T A
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:YCASCATTCTTTTAAA
--NCCATTGTTY----
 A G C T A G T C C G T A A T G C A G T C C G T A A C G T G A C T A G T C A C G T A C G T A G C T C G A T C T G A G T C A C G T A
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:YCASCATTCTTTTAAA
------TTCTNMGGAA
 A G C T A G T C C G T A A T G C A G T C C G T A A C G T G A C T A G T C A C G T A C G T A G C T C G A T C T G A G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----YCASCATTCTTTTAAA
HWWGTCAGCAWWTTT-----
 A C G T A C G T A C G T A C G T A G C T A G T C C G T A A T G C A G T C C G T A A C G T G A C T A G T C A C G T A C G T A G C T C G A T C T G A G T C A C G T A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.53
Offset:9
Orientation:forward strand
Alignment:YCASCATTCTTTTAAA--
---------ATTTGAATT
 A G C T A G T C C G T A A T G C A G T C C G T A A C G T G A C T A G T C A C G T A C G T A G C T C G A T C T G A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T