Information for 5-TTAGGCAAGTGGC (Motif 6)

A C G T G C A T C G T A A C T G A C T G A G T C C G T A C T G A A C T G A C G T A C T G C T A G G T A C
Reverse Opposite:
A C T G A G T C A G T C C G T A A G T C A G C T A C G T A C T G G T A C A G T C A C G T C G T A G T C A
p-value:1e-15
log p-value:-3.510e+01
Information Content per bp:1.900
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 22.4bp
Average Position of motif in Background42.1 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TTAGGCAAGTGGC
-AAGGCAAGTGT-
 A C G T G C A T C G T A A C T G A C T G A G T C C G T A C T G A A C T G A C G T A C T G C T A G G T A C
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TTAGGCAAGTGGC
---NTCAAGTGGN
 A C G T G C A T C G T A A C T G A C T G A G T C C G T A C T G A A C T G A C G T A C T G C T A G G T A C
A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTAGGCAAGTGGC
---NTCAAGTGG-
 A C G T G C A T C G T A A C T G A C T G A G T C C G T A C T G A A C T G A C G T A C T G C T A G G T A C
A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

USF2/MA0526.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTAGGCAAGTGGC-
---GTCATGTGACC
 A C G T G C A T C G T A A C T G A C T G A G T C C G T A C T G A A C T G A C G T A C T G C T A G G T A C A C G T
A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTAGGCAAGTGGC---
AANTTCAAGTGGCTTN
 A C G T G C A T C G T A A C T G A C T G A G T C C G T A C T G A A C T G A C G T A C T G C T A G G T A C A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

TFEB/MA0692.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTAGGCAAGTGGC
---GTCACGTGAT
 A C G T G C A T C G T A A C T G A C T G A G T C C G T A C T G A A C T G A C G T A C T G C T A G G T A C
A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTAGGCAAGTGGC
---GTCACGTGGM
 A C G T G C A T C G T A A C T G A C T G A G T C C G T A C T G A A C T G A C G T A C T G C T A G G T A C
A C G T A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

HEY1/MA0823.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTAGGCAAGTGGC
---GGCACGTGTC
 A C G T G C A T C G T A A C T G A C T G A G T C C G T A C T G A A C T G A C G T A C T G C T A G G T A C
A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

HES5/MA0821.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTAGGCAAGTGGC-
--TGGCACGTGCCG
 A C G T G C A T C G T A A C T G A C T G A G T C C G T A C T G A A C T G A C G T A C T G C T A G G T A C A C G T
A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTAGGCAAGTGGC---
AATTTCAAGTGGCTTN
 A C G T G C A T C G T A A C T G A C T G A G T C C G T A C T G A A C T G A C G T A C T G C T A G G T A C A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A