Information for 18-AGGACCACAT (Motif 44)

C G T A A C T G A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C T G A C T G A C G T A G T C A G T C A C G T
p-value:1e-5
log p-value:-1.219e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.0 +/- 34.7bp
Average Position of motif in Background68.5 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGACCACAT--
NWAACCACADNN
 C G T A A C T G A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGGACCACAT----
CATAAGACCACCATTAC
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGGACCACAT-
-AAACCACAGC
 C G T A A C T G A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGGACCACAT--
--AAGCACATGG
 C G T A A C T G A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGACCACAT
NAAACCACAG
 C G T A A C T G A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGACCACAT--
GCGACCACACTG
 C G T A A C T G A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGACCACAT--
-AAACCACAGAN
 C G T A A C T G A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGGACCACAT-----
---ACCACATCCTGT
 C G T A A C T G A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGACCACAT-
-AAACCACANN
 C G T A A C T G A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGACCACAT---
-GGACCACCCACG
 C G T A A C T G A C T G C G T A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G