Information for 16-GTAGCMCRAT (Motif 42)

A C T G A C G T C G T A A C T G A G T C G T C A A G T C C T G A C G T A C G A T
Reverse Opposite:
C G T A A C G T A G C T A C T G A C G T A C T G A G T C A C G T C G T A A G T C
p-value:1e-6
log p-value:-1.473e+01
Information Content per bp:1.893
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif17.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.7 +/- 29.3bp
Average Position of motif in Background52.0 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-7
Orientation:forward strand
Alignment:-------GTAGCMCRAT
ATTTACAGTAGCAAAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C G T C A A G T C C T G A C G T A C G A T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTAGCMCRAT
GTTGCGCAAT
 A C T G A C G T C G T A A C T G A G T C G T C A A G T C C T G A C G T A C G A T
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------GTAGCMCRAT
ATGTACAGTAGCAAAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C G T C A A G T C C T G A C G T A C G A T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------GTAGCMCRAT
NNNTTAGGTAGCNTNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C G T C A A G T C C T G A C G T A C G A T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------GTAGCMCRAT
NNTGTAGGTAGCANNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C G T C A A G T C C T G A C G T A C G A T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTAGCMCRAT-------
GAAGTANCACGAATNMRAGT
 A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C G T C A A G T C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

CEBPA/MA0102.3/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTAGCMCRAT-
ATTGCACAATA
 A C T G A C G T C G T A A C T G A G T C G T C A A G T C C T G A C G T A C G A T A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

CEBPG/MA0838.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTAGCMCRAT
ATTGCGCAAT
 A C T G A C G T C G T A A C T G A G T C G T C A A G T C C T G A C G T A C G A T
T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTAGCMCRAT
-CAGCC----
 A C T G A C G T C G T A A C T G A G T C G T C A A G T C C T G A C G T A C G A T
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTAGCMCRAT
AATGTATCAAT--
 A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C G T C A A G T C C T G A C G T A C G A T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T