Information for 24-AGCCWYATCTGCTATG (Motif 39)

C G T A C T A G A T G C A G T C C G A T G A C T G C T A A G C T G A T C A G C T A C T G A G T C C G A T G C T A C G A T A C T G
Reverse Opposite:
A G T C C G T A C G A T C G T A C T A G G T A C C T G A C A T G T C G A C A G T C T G A C G T A A C T G A T C G A G T C C G A T
p-value:1e-8
log p-value:-1.844e+01
Information Content per bp:1.733
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.7 +/- 12.0bp
Average Position of motif in Background43.6 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGCCWYATCTGCTATG---
----TNTCCTGCTGTGNNG
 C G T A C T A G A T G C A G T C C G A T G A C T G C T A A G C T G A T C A G C T A C T G A G T C C G A T G C T A C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGCCWYATCTGCTATG
----CCCCCTGCTGTG
 C G T A C T A G A T G C A G T C C G A T G A C T G C T A A G C T G A T C A G C T A C T G A G T C C G A T G C T A C G A T A C T G
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGCCWYATCTGCTATG---
----TCNCCTGCTGNGNNN
 C G T A C T A G A T G C A G T C C G A T G A C T G C T A A G C T G A T C A G C T A C T G A G T C C G A T G C T A C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGCCWYATCTGCTATG---
----NNTCCTGCTGTGNNN
 C G T A C T A G A T G C A G T C C G A T G A C T G C T A A G C T G A T C A G C T A C T G A G T C C G A T G C T A C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

ZEB1/MA0103.2/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGCCWYATCTGCTATG
--CCTCACCTG-----
 C G T A C T A G A T G C A G T C C G A T G A C T G C T A A G C T G A T C A G C T A C T G A G T C C G A T G C T A C G A T A C T G
A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AGCCWYATCTGCTATG
-NCCTTATCTG-----
 C G T A C T A G A T G C A G T C C G A T G A C T G C T A A G C T G A T C A G C T A C T G A G T C C G A T G C T A C G A T A C T G
A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AGCCWYATCTGCTATG
BCAGACWA----------
 A C G T A C G T C G T A C T A G A T G C A G T C C G A T G A C T G C T A A G C T G A T C A G C T A C T G A G T C C G A T G C T A C G A T A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGCCWYATCTGCTATG
CAGCC------------
 A C G T C G T A C T A G A T G C A G T C C G A T G A C T G C T A A G C T G A T C A G C T A C T G A G T C C G A T G C T A C G A T A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:AGCCWYATCTGCTATG---
----NNCGTTGCTATGGNN
 C G T A C T A G A T G C A G T C C G A T G A C T G C T A A G C T G A T C A G C T A C T G A G T C C G A T G C T A C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:forward strand
Alignment:AGCCWYATCTGCTATG
--TCTTATCTCCC---
 C G T A C T A G A T G C A G T C C G A T G A C T G C T A A G C T G A T C A G C T A C T G A G T C C G A T G C T A C G A T A C T G
A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T A C G T A C G T