Information for 20-CAGTGTDYTCTGW (Motif 35)

G T A C C G T A C A T G A C G T A T C G C A G T C A G T A G T C G C A T A G T C A C G T A T C G G C T A
Reverse Opposite:
C G A T A T G C C G T A A C T G C G T A C T A G G T C A G T C A T A G C G T C A G T A C A C G T A C T G
p-value:1e-8
log p-value:-2.042e+01
Information Content per bp:1.682
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.01%
Number of Background Sequences with motif505.2
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets52.3 +/- 25.5bp
Average Position of motif in Background48.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAGTGTDYTCTGW
GVACAGNMTGTYCTB-
 A C G T A C G T A C G T G T A C C G T A C A T G A C G T A T C G C A G T C A G T A G T C G C A T A G T C A C G T A T C G G C T A
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.59
Offset:8
Orientation:forward strand
Alignment:CAGTGTDYTCTGW-
--------GCTGTG
 G T A C C G T A C A T G A C G T A T C G C A G T C A G T A G T C G C A T A G T C A C G T A T C G G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAGTGTDYTCTGW
GRACAGWMTGTYCTB-
 A C G T A C G T A C G T G T A C C G T A C A T G A C G T A T C G C A G T C A G T A G T C G C A T A G T C A C G T A T C G G C T A
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAGTGTDYTCTGW
GAACADWATGTTCTT-
 A C G T A C G T A C G T G T A C C G T A C A T G A C G T A T C G C A G T C A G T A G T C G C A T A G T C A C G T A T C G G C T A
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CAGTGTDYTCTGW
AGNACAGNCTGTTCTN-
 A C G T A C G T A C G T A C G T G T A C C G T A C A T G A C G T A T C G C A G T C A G T A G T C G C A T A G T C A C G T A T C G G C T A
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGTDYTCTGW---
NNNNTGAGCACTGTNNG
 A C G T G T A C C G T A C A T G A C G T A T C G C A G T C A G T A G T C G C A T A G T C A C G T A T C G G C T A A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGTGTDYTCTGW
-AGGVNCCTTTGT
 G T A C C G T A C A T G A C G T A T C G C A G T C A G T A G T C G C A T A G T C A C G T A T C G G C T A
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

GATA2/MA0036.2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAGTGTDYTCTGW
AGATTCTTATCTGT
 A C G T G T A C C G T A C A T G A C G T A T C G C A G T C A G T A G T C G C A T A G T C A C G T A T C G G C T A
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAGTGTDYTCTGW
GTCATGCHTGRCTGS
 A C G T A C G T G T A C C G T A C A T G A C G T A T C G C A G T C A G T A G T C G C A T A G T C A C G T A T C G G C T A
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CAGTGTDYTCTGW
AGNACANNNTGTNCTN-
 A C G T A C G T A C G T A C G T G T A C C G T A C A T G A C G T A T C G C A G T C A G T A G T C G C A T A G T C A C G T A T C G G C T A
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C A C G T