Information for 3-KCTGACCASTWST (Motif 3)

A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A A T G C C G A T C G A T A T C G A C G T
Reverse Opposite:
C G T A A T G C C G T A C G T A A T C G A C G T C T A G A C T G A C G T A G T C C G T A A C T G G T C A
p-value:1e-16
log p-value:-3.762e+01
Information Content per bp:1.875
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.4 +/- 25.2bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:KCTGACCASTWST
--TGACCYCT---
 A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A A T G C C G A T C G A T A T C G A C G T
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:KCTGACCASTWST
--TGACCT-----
 A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A A T G C C G A T C G A T A T C G A C G T
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---KCTGACCASTWST-
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A A T G C C G A T C G A T A T C G A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--KCTGACCASTWST--
CATAAGACCACCATTAC
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A A T G C C G A T C G A T A T C G A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--KCTGACCASTWST
CNNTTGACCTTTG--
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A A T G C C G A T C G A T A T C G A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:KCTGACCASTWST
--TGACCTYA---
 A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A A T G C C G A T C G A T A T C G A C G T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---KCTGACCASTWST-
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A A T G C C G A T C G A T A T C G A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----KCTGACCASTWST
AATTTGCTGAC-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A A T G C C G A T C G A T A T C G A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--KCTGACCASTWST-
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A A T G C C G A T C G A T A T C G A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--KCTGACCASTWST-
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A A T G C C G A T C G A T A T C G A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A