Information for 15-GWTGWTTTAMRTM (Motif 29)

A C T G C G T A A C G T A C T G C G T A A C G T A C G T A G C T C G T A G T A C C T G A A C G T G T A C
Reverse Opposite:
A C T G C G T A A G C T C A G T A C G T C T G A C G T A G T C A C G A T A G T C C G T A C G A T A G T C
p-value:1e-10
log p-value:-2.397e+01
Information Content per bp:1.833
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif19.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.7 +/- 27.4bp
Average Position of motif in Background51.7 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9/MA0485.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GWTGWTTTAMRTM-
-NTGATTTATGGCC
 A C T G C G T A A C G T A C T G C G T A A C G T A C G T A G C T C G T A G T A C C T G A A C G T G T A C A C G T
A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GWTGWTTTAMRTM-
--TGATTTATGGCC
 A C T G C G T A A C G T A C T G C G T A A C G T A C G T A G C T C G T A G T A C C T G A A C G T G T A C A C G T
A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GWTGWTTTAMRTM-
--TGATTTATGGCC
 A C T G C G T A A C G T A C T G C G T A A C G T A C G T A G C T C G T A G T A C C T G A A C G T G T A C A C G T
A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GWTGWTTTAMRTM
--TGATTTATGGC
 A C T G C G T A A C G T A C T G C G T A A C G T A C G T A G C T C G T A G T A C C T G A A C G T G T A C
A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GWTGWTTTAMRTM-
--DGWTTTATGRCN
 A C T G C G T A A C G T A C T G C G T A A C G T A C G T A G C T C G T A G T A C C T G A A C G T G T A C A C G T
A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GWTGWTTTAMRTM
----ATTTGAATT
 A C T G C G T A A C G T A C T G C G T A A C G T A C G T A G C T C G T A G T A C C T G A A C G T G T A C
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GWTGWTTTAMRTM
CNGTGATTTN----
 A C G T A C T G C G T A A C G T A C T G C G T A A C G T A C G T A G C T C G T A G T A C C T G A A C G T G T A C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GWTGWTTTAMRTM
----ATTTGCATA
 A C T G C G T A A C G T A C T G C G T A A C G T A C G T A G C T C G T A G T A C C T G A A C G T G T A C
A C G T A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GWTGWTTTAMRTM
NNTTTTGTTTTGATNT
 A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A A C G T A C G T A G C T C G T A G T A C C T G A A C G T G T A C
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GWTGWTTTAMRTM--
NNNTTTGTTTACTTTTN
 A C G T A C G T A C T G C G T A A C G T A C T G C G T A A C G T A C G T A G C T C G T A G T A C C T G A A C G T G T A C A C G T A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T