Information for 17-AMTSASAGTCTGYARA (Motif 28)

G T C A G T A C A C G T A T C G C G T A T A C G C G T A T A C G A G C T A G T C A C G T A C T G A G T C C G T A C T G A C G T A
Reverse Opposite:
A C G T A G C T A C G T C T A G A G T C C G T A A C T G C T G A A G T C A C G T A T C G A C G T A T G C C G T A A C T G A C G T
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.856
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets25.8 +/- 15.0bp
Average Position of motif in Background84.7 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AMTSASAGTCTGYARA
---VBSYGTCTGG---
 G T C A G T A C A C G T A T C G C G T A T A C G C G T A T A C G A G C T A G T C A C G T A C T G A G T C C G T A C T G A C G T A
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AMTSASAGTCTGYARA
-----TWGTCTGV---
 G T C A G T A C A C G T A T C G C G T A T A C G C G T A T A C G A G C T A G T C A C G T A C T G A G T C C G T A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AMTSASAGTCTGYARA
-----CTGTCTGG---
 G T C A G T A C A C G T A T C G C G T A T A C G C G T A T A C G A G C T A G T C A C G T A C T G A G T C C G T A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AMTSASAGTCTGYARA
----TGAGTCAGCA--
 G T C A G T A C A C G T A T C G C G T A T A C G C G T A T A C G A G C T A G T C A C G T A C T G A G T C C G T A C T G A C G T A
A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AMTSASAGTCTGYARA--
---CTGAGTCAGCAATTT
 G T C A G T A C A C G T A T C G C G T A T A C G C G T A T A C G A G C T A G T C A C G T A C T G A G T C C G T A C T G A C G T A A C G T A C G T
A C G T A C G T A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

PB0041.1_Mafb_1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AMTSASAGTCTGYARA---
--NCTANGTCAGCAAATTT
 G T C A G T A C A C G T A T C G C G T A T A C G C G T A T A C G A G C T A G T C A C G T A C T G A G T C C G T A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AMTSASAGTCTGYARA--
------AATATGCAAATT
 G T C A G T A C A C G T A T C G C G T A T A C G C G T A T A C G A G C T A G T C A C G T A C T G A G T C C G T A C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AMTSASAGTCTGYARA
TGAGTGACAGSC------
 A C G T A C G T G T C A G T A C A C G T A T C G C G T A T A C G C G T A T A C G A G C T A G T C A C G T A C T G A G T C C G T A C T G A C G T A
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:AMTSASAGTCTGYARA----
-----AAGTCAGCANTTTTN
 G T C A G T A C A C G T A T C G C G T A T A C G C G T A T A C G A G C T A G T C A C G T A C T G A G T C C G T A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AMTSASAGTCTGYARA--
-------GTCAGCANNTN
 G T C A G T A C A C G T A T C G C G T A T A C G C G T A T A C G A G C T A G T C A C G T A C T G A G T C C G T A C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T