Information for 6-GACTAAAGCTTGGGAG (Motif 10)

A T C G G T C A A T G C C G A T C T G A T C G A C T G A A C T G A T G C A G C T C A G T C T A G C A T G A T C G C G T A A T C G
Reverse Opposite:
A T G C C G A T A T G C G T A C A G T C G T C A C T G A A T C G T G A C A G C T A C G T A G C T C G T A T A C G C A G T T A G C
p-value:1e-13
log p-value:-3.151e+01
Information Content per bp:1.737
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 12.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GACTAAAGCTTGGGAG
-----AAGCTTG----
 A T C G G T C A A T G C C G A T C T G A T C G A C T G A A C T G A T G C A G C T C A G T C T A G C A T G A T C G C G T A A T C G
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GACTAAAGCTTGGGAG---
--------CTTGAGTGGCT
 A T C G G T C A A T G C C G A T C T G A T C G A C T G A A C T G A T G C A G C T C A G T C T A G C A T G A T C G C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:GACTAAAGCTTGGGAG
--------CTTGGCAA
 A T C G G T C A A T G C C G A T C T G A T C G A C T G A A C T G A T G C A G C T C A G T C T A G C A T G A T C G C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.46
Offset:9
Orientation:forward strand
Alignment:GACTAAAGCTTGGGAG-
---------TTGACAGC
 A T C G G T C A A T G C C G A T C T G A T C G A C T G A A C T G A T G C A G C T C A G T C T A G C A T G A T C G C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.46
Offset:6
Orientation:forward strand
Alignment:GACTAAAGCTTGGGAG--
------NGCGTGGGCGGR
 A T C G G T C A A T G C C G A T C T G A T C G A C T G A A C T G A T G C A G C T C A G T C T A G C A T G A T C G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.45
Offset:6
Orientation:forward strand
Alignment:GACTAAAGCTTGGGAG
------TGCGTGGGYG
 A T C G G T C A A T G C C G A T C T G A T C G A C T G A A C T G A T G C A G C T C A G T C T A G C A T G A T C G C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.45
Offset:8
Orientation:forward strand
Alignment:GACTAAAGCTTGGGAG--
--------BTBRAGTGSN
 A T C G G T C A A T G C C G A T C T G A T C G A C T G A A C T G A T G C A G C T C A G T C T A G C A T G A T C G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.44
Offset:8
Orientation:reverse strand
Alignment:GACTAAAGCTTGGGAG--
--------VBTGWCAGCB
 A T C G G T C A A T G C C G A T C T G A T C G A C T G A A C T G A T G C A G C T C A G T C T A G C A T G A T C G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

EGR4/MA0733.1/Jaspar

Match Rank:9
Score:0.44
Offset:3
Orientation:reverse strand
Alignment:GACTAAAGCTTGGGAG---
---AANTGCGTGGGCGTNN
 A T C G G T C A A T G C C G A T C T G A T C G A C T G A A C T G A T G C A G C T C A G T C T A G C A T G A T C G C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.43
Offset:2
Orientation:forward strand
Alignment:GACTAAAGCTTGGGAG-
--GTCATGCHTGRCTGS
 A T C G G T C A A T G C C G A T C T G A T C G A C T G A A C T G A T G C A G C T C A G T C T A G C A T G A T C G C G T A A T C G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C