Information for 10-ABAAAGAAGCTTC (Motif 10)

C G T A A G T C C G T A C G T A C T G A A C T G C G T A C G T A A C T G A G T C C G A T C G A T A G T C
Reverse Opposite:
A C T G C G T A C G T A C T A G G T A C A C G T A C G T G T A C A G C T A C G T A C G T T A C G C G A T
p-value:1e-10
log p-value:-2.379e+01
Information Content per bp:1.844
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.5 +/- 30.6bp
Average Position of motif in Background54.6 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ABAAAGAAGCTTC
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C T G A A C T G C G T A C G T A A C T G A G T C C G A T C G A T A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ABAAAGAAGCTTC
ACAAAGGNBCCT-
 C G T A A G T C C G T A C G T A C T G A A C T G C G T A C G T A A C T G A G T C C G A T C G A T A G T C
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ABAAAGAAGCTTC
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C T G A A C T G C G T A C G T A A C T G A G T C C G A T C G A T A G T C
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ABAAAGAAGCTTC
-----CAAGCTT-
 C G T A A G T C C G T A C G T A C T G A A C T G C G T A C G T A A C T G A G T C C G A T C G A T A G T C
A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ABAAAGAAGCTTC
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C T G A A C T G C G T A C G T A A C T G A G T C C G A T C G A T A G T C
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ABAAAGAAGCTTC
AAACAAACATTC---
 A C G T A C G T C G T A A G T C C G T A C G T A C T G A A C T G C G T A C G T A A C T G A G T C C G A T C G A T A G T C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ABAAAGAAGCTTC
ACAAAG-------
 C G T A A G T C C G T A C G T A C T G A A C T G C G T A C G T A A C T G A G T C C G A T C G A T A G T C
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ABAAAGAAGCTTC
GGAACAAAGR------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C T G A A C T G C G T A C G T A A C T G A G T C C G A T C G A T A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ABAAAGAAGCTTC-
ADGGYAGYAGCATCT
 A C G T C G T A A G T C C G T A C G T A C T G A A C T G C G T A C G T A A C T G A G T C C G A T C G A T A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ABAAAGAAGCTTC
GTAAACAA-----
 C G T A A G T C C G T A C G T A C T G A A C T G C G T A C G T A A C T G A G T C C G A T C G A T A G T C
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T