Information for 15-CCYTTTGTGS (Motif 25)

G T A C A T G C A G C T A G C T A C G T A C G T A C T G A C G T C T A G A T C G
Reverse Opposite:
A T G C A G T C C G T A A G T C G T C A G T C A C T G A C T G A A T C G A C T G
p-value:1e-7
log p-value:-1.766e+01
Information Content per bp:1.780
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif106.0
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets47.8 +/- 24.8bp
Average Position of motif in Background45.4 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CCYTTTGTGS
-CCWTTGTY-
 G T A C A T G C A G C T A G C T A C G T A C G T A C T G A C G T C T A G A T C G
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CCYTTTGTGS-
-CCTTTGTTTT
 G T A C A T G C A G C T A G C T A C G T A C G T A C T G A C G T C T A G A T C G A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CCYTTTGTGS
-CCTTTGTT-
 G T A C A T G C A G C T A G C T A C G T A C G T A C T G A C G T C T A G A T C G
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCYTTTGTGS-
-CCWTTGTYYB
 G T A C A T G C A G C T A G C T A C G T A C G T A C T G A C G T C T A G A T C G A C G T
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CCYTTTGTGS
--CTTTGT--
 G T A C A T G C A G C T A G C T A C G T A C G T A C T G A C G T C T A G A T C G
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CCYTTTGTGS
AGGVNCCTTTGT--
 A C G T A C G T A C G T A C G T G T A C A T G C A G C T A G C T A C G T A C G T A C T G A C G T C T A G A T C G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCYTTTGTGS-
-CCATTGTTNY
 G T A C A T G C A G C T A G C T A C G T A C G T A C T G A C G T C T A G A T C G A C G T
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCYTTTGTGS-
-YCTTTGTTCC
 G T A C A T G C A G C T A G C T A C G T A C G T A C T G A C G T C T A G A T C G A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCYTTTGTGS----
--NNHTGTGGTTWN
 G T A C A T G C A G C T A G C T A C G T A C G T A C T G A C G T C T A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCYTTTGTGS---
NNNCCATTGTGTNAN
 A C G T A C G T G T A C A T G C A G C T A G C T A C G T A C G T A C T G A C G T C T A G A T C G A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G