Information for 13-GAGAGTDACAGCACVG (Motif 23)

A T C G C G T A A T C G C G T A A C T G A C G T C G T A C T G A G T A C C G T A A C T G A G T C C G T A G T A C T C G A A T C G
Reverse Opposite:
A T G C A C G T A C T G C G A T A C T G T G A C A C G T A C T G A G C T G A C T G T C A A G T C A C G T A T G C C G A T A T G C
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.756
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 34.0bp
Average Position of motif in Background78.6 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAGAGTDACAGCACVG
-AGGGTAACAGC----
 A T C G C G T A A T C G C G T A A C T G A C G T C G T A C T G A G T A C C G T A A C T G A G T C C G T A G T A C T C G A A T C G
A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAGAGTDACAGCACVG
ADGGYAGYAGCATCT---
 A C G T A C G T A T C G C G T A A T C G C G T A A C T G A C G T C G T A C T G A G T A C C G T A A C T G A G T C C G T A G T A C T C G A A T C G
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGAGTDACAGCACVG-
GATATTGACAGCTGCGT
 A T C G C G T A A T C G C G T A A C T G A C G T C G T A C T G A G T A C C G T A A C T G A G T C C G T A G T A C T C G A A T C G A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGAGTDACAGCACVG
NTGATTGACAGN----
 A T C G C G T A A T C G C G T A A C T G A C G T C G T A C T G A G T A C C G T A A C T G A G T C C G T A G T A C T C G A A T C G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGAGTDACAGCACVG
BTGABTGACAGS----
 A T C G C G T A A T C G C G T A A C T G A C G T C G T A C T G A G T A C C G T A A C T G A G T C C G T A G T A C T C G A A T C G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAGAGTDACAGCACVG
-TGAGTGACAGSC---
 A T C G C G T A A T C G C G T A A C T G A C G T C G T A C T G A G T A C C G T A A C T G A G T C C G T A G T A C T C G A A T C G
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGAGTDACAGCACVG
-AGAGRRACAGCWGAC
 A T C G C G T A A T C G C G T A A C T G A C G T C G T A C T G A G T A C C G T A A C T G A G T C C G T A G T A C T C G A A T C G
A C G T T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GAGAGTDACAGCACVG
ATTTACAGTAGCAAAA---
 A C G T A C G T A C G T A T C G C G T A A T C G C G T A A C T G A C G T C G T A C T G A G T A C C G T A A C T G A G T C C G T A G T A C T C G A A T C G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GAGAGTDACAGCACVG
------CACAGN----
 A T C G C G T A A T C G C G T A A C T G A C G T C G T A C T G A G T A C C G T A A C T G A G T C C G T A G T A C T C G A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GAGAGTDACAGCACVG-
TCNNTTTACAGCGNNNT
 A T C G C G T A A T C G C G T A A C T G A C G T C G T A C T G A G T A C C G T A A C T G A G T C C G T A G T A C T C G A A T C G A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T