Information for 21-GGGGTTGCAAACC (Motif 20)

C T A G C A T G C T A G C T A G C A G T C A G T A C T G T G A C G T C A T C G A G T C A A G T C G T A C
Reverse Opposite:
C A T G A C T G A C G T A G C T C A G T A C T G T G A C G T C A G C T A G A T C G A T C G T A C G A T C
p-value:1e-9
log p-value:-2.143e+01
Information Content per bp:1.673
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif150.0
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets55.6 +/- 21.2bp
Average Position of motif in Background49.3 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGGGTTGCAAACC
-CGGTTTCAAA--
 C T A G C A T G C T A G C T A G C A G T C A G T A C T G T G A C G T C A T C G A G T C A A G T C G T A C
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGGTTGCAAACC-----
-NNTTTTCACACCTTNNN
 C T A G C A T G C T A G C T A G C A G T C A G T A C T G T G A C G T C A T C G A G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGGGTTGCAAACC
GGGATTGCATNN-
 C T A G C A T G C T A G C T A G C A G T C A G T A C T G T G A C G T C A T C G A G T C A A G T C G T A C
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGGGTTGCAAACC----
-ACTATGCCAACCTACC
 C T A G C A T G C T A G C T A G C A G T C A G T A C T G T G A C G T C A T C G A G T C A A G T C G T A C A C G T A C G T A C G T A C G T
A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGGGTTGCAAACC-
----TTTCACACCT
 C T A G C A T G C T A G C T A G C A G T C A G T A C T G T G A C G T C A T C G A G T C A A G T C G T A C A C G T
A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGGTTGCAAACC
NATGTTGCAA---
 C T A G C A T G C T A G C T A G C A G T C A G T A C T G T G A C G T C A T C G A G T C A A G T C G T A C
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GGGGTTGCAAACC-----
--------AAACCACANN
 C T A G C A T G C T A G C T A G C A G T C A G T A C T G T G A C G T C A T C G A G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGGGTTGCAAACC--
--NTTTTCACACCTT
 C T A G C A T G C T A G C T A G C A G T C A G T A C T G T G A C G T C A T C G A G T C A A G T C G T A C A C G T A C G T
A C G T A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GGGGTTGCAAACC----
--------AAACCGCAA
 C T A G C A T G C T A G C T A G C A G T C A G T A C T G T G A C G T C A T C G A G T C A A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GGGGTTGCAAACC----
-------NAAACCACAG
 C T A G C A T G C T A G C T A G C A G T C A G T A C T G T G A C G T C A T C G A G T C A A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G