Information for 18-CCAGCTCAAAGCA (Motif 16)

A G T C A G T C C G T A A T C G A G T C A C G T A G T C C G T A T C G A C G T A A C T G G T A C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C G T A C G T A C T G C G T A A C T G A T G C A C G T A C T G A C T G
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.2 +/- 13.9bp
Average Position of motif in Background69.9 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCAGCTCAAAGCA
--ACATCAAAGG-
 A G T C A G T C C G T A A T C G A G T C A C G T A G T C C G T A T C G A C G T A A C T G G T A C C G T A
A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCAGCTCAAAGCA-
--ACATCAAAGGNA
 A G T C A G T C C G T A A T C G A G T C A C G T A G T C C G T A T C G A C G T A A C T G G T A C C G T A A C G T
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCTCAAAGCA---
NNNAGATCAAAGGANNN
 A C G T A G T C A G T C C G T A A T C G A G T C A C G T A G T C C G T A T C G A C G T A A C T G G T A C C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCAGCTCAAAGCA-
AAAGATCAAAGGAA
 A G T C A G T C C G T A A T C G A G T C A C G T A G T C C G T A T C G A C G T A A C T G G T A C C G T A A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0083.1_Tcf7_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTCAAAGCA---
TATAGATCAAAGGAAAA
 A C G T A G T C A G T C C G T A A T C G A G T C A C G T A G T C C G T A T C G A C G T A A C T G G T A C C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCAGCTCAAAGCA
--ACWTCAAAGG-
 A G T C A G T C C G T A A T C G A G T C A C G T A G T C C G T A T C G A C G T A A C T G G T A C C G T A
A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTCAAAGCA---
TATAGATCAAAGGAAAA
 A C G T A G T C A G T C C G T A A T C G A G T C A C G T A G T C C G T A T C G A C G T A A C T G G T A C C G T A A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCTCAAAGCA---
NANAGATCAAAGGGNNN
 A C G T A G T C A G T C C G T A A T C G A G T C A C G T A G T C C G T A T C G A C G T A A C T G G T A C C G T A A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCAGCTCAAAGCA
AAAGATCAAAGG-
 A G T C A G T C C G T A A T C G A G T C A C G T A G T C C G T A T C G A C G T A A C T G G T A C C G T A
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCAGCTCAAAGCA--
AAAGATCAAAGGGTT
 A G T C A G T C C G T A A T C G A G T C A C G T A G T C C G T A T C G A C G T A A C T G G T A C C G T A A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T