Information for 11-GGGAAATYCC (Motif 10)

A C T G A C T G C A T G C G T A C G T A C T G A A G C T A G T C G A T C A G T C
Reverse Opposite:
A C T G C T A G T C A G T C G A G A C T A C G T A C G T G T A C A G T C T G A C
p-value:1e-12
log p-value:-2.951e+01
Information Content per bp:1.733
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.66%
Number of Background Sequences with motif453.0
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets45.0 +/- 28.2bp
Average Position of motif in Background52.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:GGGAAATYCC-
-GGAAATTCCC
 A C T G A C T G C A T G C G T A C G T A C T G A A G C T A G T C G A T C A G T C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:GGGAAATYCC-
-GGAAANCCCC
 A C T G A C T G C A T G C G T A C G T A C T G A A G C T A G T C G A T C A G T C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GGGAAATYCC--
GGGAAATCCCCN
 A C T G A C T G C A T G C G T A C G T A C T G A A G C T A G T C G A T C A G T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.89
Offset:1
Orientation:forward strand
Alignment:GGGAAATYCC-
-GGAAATTCCC
 A C T G A C T G C A T G C G T A C G T A C T G A A G C T A G T C G A T C A G T C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:GGGAAATYCC-
-GGAAATCCCC
 A C T G A C T G C A T G C G T A C G T A C T G A A G C T A G T C G A T C A G T C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAATYCC
NNTGGAAANN--
 A C G T A C G T A C T G A C T G C A T G C G T A C G T A C T G A A G C T A G T C G A T C A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAATYCC
AATGGAAAAT--
 A C G T A C G T A C T G A C T G C A T G C G T A C G T A C T G A A G C T A G T C G A T C A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGGAAATYCC
TGGAAAA---
 A C T G A C T G C A T G C G T A C G T A C T G A A G C T A G T C G A T C A G T C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGAAATYCC-
GGGGGAATCCCC
 A C G T A C T G A C T G C A T G C G T A C G T A C T G A A G C T A G T C G A T C A G T C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB2/MA0778.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAATYCC--
AGGGGAATCCCCT
 A C G T A C T G A C T G C A T G C G T A C G T A C T G A A G C T A G T C G A T C A G T C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T