Information for 4-AGGCACCCTA (Motif 12)

T G C A A C T G C T A G T A G C G T C A A T G C A G T C A T G C A C G T G T C A
Reverse Opposite:
A C G T C G T A A T C G C T A G A T C G C A G T A T C G A G T C G T A C A C G T
p-value:1e-8
log p-value:-2.033e+01
Information Content per bp:1.836
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif55.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets43.2 +/- 25.3bp
Average Position of motif in Background46.4 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGGCACCCTA----
CGAAGCACACAAAATA
 A C G T A C G T T G C A A C T G C T A G T A G C G T C A A T G C A G T C A T G C A C G T G T C A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGCACCCTA
-GGCGCGCT-
 T G C A A C T G C T A G T A G C G T C A A T G C A G T C A T G C A C G T G T C A
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGCACCCTA----
AAGCCCCCCAAAAAT
 A C G T T G C A A C T G C T A G T A G C G T C A A T G C A G T C A T G C A C G T G T C A A C G T A C G T A C G T A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGCACCCTA---
-AGGTCTCTAACC
 T G C A A C T G C T A G T A G C G T C A A T G C A G T C A T G C A C G T G T C A A C G T A C G T A C G T
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGCACCCTA-
AGCCACTCAAG
 T G C A A C T G C T A G T A G C G T C A A T G C A G T C A T G C A C G T G T C A A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGGCACCCTA--
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C G T T G C A A C T G C T A G T A G C G T C A A T G C A G T C A T G C A C G T G T C A A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGGCACCCTA----
GATAACATCCTAGTAG
 A C G T A C G T T G C A A C T G C T A G T A G C G T C A A T G C A G T C A T G C A C G T G T C A A C G T A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------AGGCACCCTA
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G C T A G T A G C G T C A A T G C A G T C A T G C A C G T G T C A
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGGCACCCTA
NGTGGGCAT----
 A C G T A C G T A C G T T G C A A C T G C T A G T A G C G T C A A T G C A G T C A T G C A C G T G T C A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGCACCCTA
AAGACCCYYN
 T G C A A C T G C T A G T A G C G T C A A T G C A G T C A T G C A C G T G T C A
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C