Information for 8-GGAAGGCGGCCGAACA (Motif 11)

C T A G C T A G G C T A C G T A A C T G A C T G A G T C C T A G A C T G A G T C T G A C A C T G C G T A G T C A A G T C C G T A
Reverse Opposite:
C G A T A C T G A C G T A C G T A G T C A C T G A C T G A G T C A G T C A C T G A G T C A G T C A C G T C A G T A G T C A G T C
p-value:1e-10
log p-value:-2.490e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.6 +/- 22.6bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGAAGGCGGCCGAACA
CAAGATGGCGGC------
 A C G T A C G T C T A G C T A G G C T A C G T A A C T G A C T G A G T C C T A G A C T G A G T C T G A C A C T G C G T A G T C A A G T C C G T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GGAAGGCGGCCGAACA
-----GAGSCCGAGC-
 C T A G C T A G G C T A C G T A A C T G A C T G A G T C C T A G A C T G A G T C T G A C A C T G C G T A G T C A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGAAGGCGGCCGAACA
NNNAAGGGGGCGGGNNN
 A C G T C T A G C T A G G C T A C G T A A C T G A C T G A G T C C T A G A C T G A G T C T G A C A C T G C G T A G T C A A G T C C G T A
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0124.1_Gabpa_2/Jaspar

Match Rank:4
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------GGAAGGCGGCCGAACA
NNNNGGGGGAAGANGG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G G C T A C G T A A C T G A C T G A G T C C T A G A C T G A G T C T G A C A C T G C G T A G T C A A G T C C G T A
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGAAGGCGGCCGAACA
GGGNGGGGGCGGGGC-
 C T A G C T A G G C T A C G T A A C T G A C T G A G T C C T A G A C T G A G T C T G A C A C T G C G T A G T C A A G T C C G T A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GGAAGGCGGCCGAACA
NGAAGC----------
 C T A G C T A G G C T A C G T A A C T G A C T G A G T C C T A G A C T G A G T C T G A C A C T G C G T A G T C A A G T C C G T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GGAAGGCGGCCGAACA-----
----AACACCAAAACAAAGGA
 C T A G C T A G G C T A C G T A A C T G A C T G A G T C C T A G A C T G A G T C T G A C A C T G C G T A G T C A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GGAAGGCGGCCGAACA
AGAGRRACAGCWGAC--
 A C G T C T A G C T A G G C T A C G T A A C T G A C T G A G T C C T A G A C T G A G T C T G A C A C T G C G T A G T C A A G T C C G T A
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GGAAGGCGGCCGAACA
ATAAAGGCGCGCGAT--
 A C G T C T A G C T A G G C T A C G T A A C T G A C T G A G T C C T A G A C T G A G T C T G A C A C T G C G T A G T C A A G T C C G T A
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GGAAGGCGGCCGAACA
TGGCAGNCTGCCAG---
 A C G T C T A G C T A G G C T A C G T A A C T G A C T G A G T C C T A G A C T G A G T C T G A C A C T G C G T A G T C A A G T C C G T A
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T