Information for 8-ATGTCBCTGTGCC (Motif 9)

G T C A A G C T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G A T A T C G A T G C A G T C
Reverse Opposite:
C T A G A T C G A T G C C G T A A G T C G T C A A C T G T A C G A C T G G T C A A G T C C T G A A C G T
p-value:1e-11
log p-value:-2.546e+01
Information Content per bp:1.843
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.8 +/- 22.8bp
Average Position of motif in Background58.6 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATGTCBCTGTGCC-
TTGGCATGGTGCCA
 G T C A A G C T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G A T A T C G A T G C A G T C A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGTCBCTGTGCC--
CTTGGCANNNTGCCAA
 A C G T G T C A A G C T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G A T A T C G A T G C A G T C A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ATGTCBCTGTGCC---
------CTGTTCCTGG
 G T C A A G C T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G A T A T C G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATGTCBCTGTGCC----
-TGACCCAGTGACCTAC
 G T C A A G C T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G A T A T C G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATGTCBCTGTGCC
-TGACCTTGACCT
 G T C A A G C T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G A T A T C G A T G C A G T C
A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ATGTCBCTGTGCC
-----GCTGTG--
 G T C A A G C T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G A T A T C G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATGTCBCTGTGCC-
CTGGCAGNCTGCCA
 G T C A A G C T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G A T A T C G A T G C A G T C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ATGTCBCTGTGCC-
NAGGTCACNNTGACC
 A C G T G T C A A G C T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G A T A T C G A T G C A G T C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ATGTCBCTGTGCC---
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T G T C A A G C T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G A T A T C G A T G C A G T C A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ATGTCBCTGTGCC-
CAKCTGKYCYYTTYCCC
 A C G T A C G T A C G T G T C A A G C T A C T G A C G T A G T C A G T C A G T C A C G T A C T G C G A T A T C G A T G C A G T C A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C