Information for 5-GTCGCTGCGGGTC (Motif 3)

A C T G A C G T A G T C A T C G A G T C A C G T A C T G A G T C A C T G A T C G A T C G A C G T A G T C
Reverse Opposite:
A C T G C G T A A T G C A T G C A G T C A C T G A G T C C G T A A C T G A T G C A C T G C G T A A G T C
p-value:1e-13
log p-value:-3.081e+01
Information Content per bp:1.924
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 30.4bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0024.1_Gcm1_1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCGCTGCGGGTC---
NNNNATGCGGGTNNNN
 A C T G A C G T A G T C A T C G A G T C A C G T A C T G A G T C A C T G A T C G A T C G A C G T A G T C A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCGCTGCGGGTC
NNGCNCTGCGCGGC
 A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G A G T C A C T G A T C G A T C G A C G T A G T C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTCGCTGCGGGTC-----
--CGCGCCGGGTCACGTA
 A C T G A C G T A G T C A T C G A G T C A C G T A C T G A G T C A C T G A T C G A T C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTCGCTGCGGGTC
---TATGCGGGTA
 A C T G A C G T A G T C A T C G A G T C A C G T A C T G A G T C A C T G A T C G A T C G A C G T A G T C
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

GLIS2/MA0736.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCGCTGCGGGTC
CTTCGCGGGGGGTC
 A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G A G T C A C T G A T C G A T C G A C G T A G T C
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTCGCTGCGGGTC-
---CATGCGGGTAC
 A C T G A C G T A G T C A T C G A G T C A C G T A C T G A G T C A C T G A T C G A T C G A C G T A G T C A C G T
A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GTCGCTGCGGGTC---
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G A G T C A C T G A T C G A T C G A C G T A G T C A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

GLIS1/MA0735.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTCGCTGCGGGTC-
GCTTCGTGGGGGGTCT
 A C G T A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G A G T C A C T G A T C G A T C G A C G T A G T C A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GTCGCTGCGGGTC
---GCTGTG----
 A C T G A C G T A G T C A T C G A G T C A C G T A C T G A G T C A C T G A T C G A T C G A C G T A G T C
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTCGCTGCGGGTC-
GGGTTACTANAGGTCA
 A C G T A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G A G T C A C T G A T C G A T C G A C G T A G T C A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A