p-value: | 1e-3 |
log p-value: | -8.771e+00 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 0.24% |
Number of Background Sequences with motif | 1.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 36.8 +/- 23.8bp |
Average Position of motif in Background | 16.7 +/- 3.1bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 2.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCCTGACCTTACT ---TGACCTYA-- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCCTGACCTTACT --GTGACCTT--- |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCCTGACCTTACT TGACCTTGACCT---- |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 4 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCCTGACCTTACT TGACCTTGACCT---- |
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RORA/MA0071.1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCCTGACCTTACT ---TGACCTTGAT |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCCTGACCTTACT ---TGACCT---- |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 7 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCCTGACCTTACT --NTGACCTTGA- |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 8 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCCTGACCTTACT -BNTGDCCTTG-- |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCCTGACCTTACT CNNTTGACCTTTG- |
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Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
Match Rank: | 10 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCCTGACCTTACT-- ---TGACCTTTNCNT |
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