Information for 8-TGWSAKKGGAATAGTG (Motif 20)

A C G T A C T G C G A T A T C G C G T A A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T C G T A A C G T A C G T A G T C A G T C G T A C G T A C A C G T A T C G C G A T A G T C C G T A
p-value:1e-6
log p-value:-1.391e+01
Information Content per bp:1.903
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 21.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGWSAKKGGAATAGTG
---AAGAGGATTAG--
 A C G T A C T G C G A T A T C G C G T A A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G
A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGWSAKKGGAATAGTG
------TGGAACAGMA
 A C G T A C T G C G A T A T C G C G T A A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

SPIB/MA0081.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGWSAKKGGAATAGTG
----AGAGGAA-----
 A C G T A C T G C G A T A T C G C G T A A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TGWSAKKGGAATAGTG
------TGGAAAA---
 A C G T A C T G C G A T A T C G C G T A A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGWSAKKGGAATAGTG---
--NNAAGGGATTAACGANT
 A C G T A C T G C G A T A T C G C G T A A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TGWSAKKGGAATAGTG
-----GNGGATTAGN-
 A C G T A C T G C G A T A T C G C G T A A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TGWSAKKGGAATAGTG
-----NNGGATTAGN-
 A C G T A C T G C G A T A T C G C G T A A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TGWSAKKGGAATAGTG
------GGGATTANN-
 A C G T A C T G C G A T A T C G C G T A A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TGWSAKKGGAATAGTG
----NNTGGAAANN--
 A C G T A C T G C G A T A T C G C G T A A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TGWSAKKGGAATAGTG
-------GGATTAGC-
 A C G T A C T G C G A T A T C G C G T A A C G T A C G T A C T G A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T