Information for 9-CAGAAGGACA (Motif 18)

T G A C G C T A A T C G T C G A T G C A A C T G C T A G T C G A T A G C T G C A
Reverse Opposite:
A C G T A T C G A G C T G A T C G T A C A C G T A G C T T A G C C G A T A C T G
p-value:1e-7
log p-value:-1.735e+01
Information Content per bp:1.683
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.82%
Number of Background Sequences with motif1475.1
Percentage of Background Sequences with motif3.08%
Average Position of motif in Targets49.2 +/- 29.8bp
Average Position of motif in Background50.8 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CAGAAGGACA-
---AAGGTCAC
 T G A C G C T A A T C G T C G A T G C A A C T G C T A G T C G A T A G C T G C A A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGAAGGACA--
--CAAGGHCANV
 T G A C G C T A A T C G T C G A T G C A A C T G C T A G T C G A T A G C T G C A A C G T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAGAAGGACA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T T G A C G C T A A T C G T C G A T G C A A C T G C T A G T C G A T A G C T G C A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAGAAGGACA
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A C G T T G A C G C T A A T C G T C G A T G C A A C T G C T A G T C G A T A G C T G C A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGAAGGACA
AACAGATGGC--
 A C G T A C G T T G A C G C T A A T C G T C G A T G C A A C T G C T A G T C G A T A G C T G C A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGAAGGACA
AACAGATGGT--
 A C G T A C G T T G A C G C T A A T C G T C G A T G C A A C T G C T A G T C G A T A G C T G C A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAGAAGGACA-
-TCAAGGTCAT
 T G A C G C T A A T C G T C G A T G C A A C T G C T A G T C G A T A G C T G C A A C G T
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAGAAGGACA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T T G A C G C T A A T C G T C G A T G C A A C T G C T A G T C G A T A G C T G C A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGAAGGACA
AACAKATGGY--
 A C G T A C G T T G A C G C T A A T C G T C G A T G C A A C T G C T A G T C G A T A G C T G C A
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGAAGGACA--
NTGATTGACAGN
 T G A C G C T A A T C G T C G A T G C A A C T G C T A G T C G A T A G C T G C A A C G T A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G