Information for 4-ACAGCCCTGCCTGGCG (Motif 7)

C G T A A G T C C G T A A T C G G T A C A G T C A G T C A C G T A C T G A T G C A G T C A C G T A C T G A T C G G T A C A C T G
Reverse Opposite:
A G T C A C T G A T G C A G T C C G T A C T A G A T C G A G T C C G T A A C T G A C T G A C T G A T G C C G A T A C T G A C G T
p-value:1e-8
log p-value:-2.042e+01
Information Content per bp:1.851
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 15.6bp
Average Position of motif in Background57.7 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCCTGCCTGGCG
GTCATGCHTGRCTGS--
 A C G T C G T A A G T C C G T A A T C G G T A C A G T C A G T C A C G T A C T G A T G C A G T C A C G T A C T G A T C G G T A C A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACAGCCCTGCCTGGCG
CCTCACCTG-------
 C G T A A G T C C G T A A T C G G T A C A G T C A G T C A C G T A C T G A T G C A G T C A C G T A C T G A T C G G T A C A C T G
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACAGCCCTGCCTGGCG
--NNACTTGCCTT---
 C G T A A G T C C G T A A T C G G T A C A G T C A G T C A C G T A C T G A T G C A G T C A C G T A C T G A T C G G T A C A C T G
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACAGCCCTGCCTGGCG
RYHYACCTGB------
 C G T A A G T C C G T A A T C G G T A C A G T C A G T C A C G T A C T G A T G C A G T C A C G T A C T G A T C G G T A C A C T G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ACAGCCCTGCCTGGCG
-NNCACCTGNN-----
 C G T A A G T C C G T A A T C G G T A C A G T C A G T C A C G T A C T G A T G C A G T C A C G T A C T G A T C G G T A C A C T G
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ACAGCCCTGCCTGGCG
------CTGTCTGG--
 C G T A A G T C C G T A A T C G G T A C A G T C A G T C A C G T A C T G A T G C A G T C A C G T A C T G A T C G G T A C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:ACAGCCCTGCCTGGCG
-CGCACCTGCT-----
 C G T A A G T C C G T A A T C G G T A C A G T C A G T C A C G T A C T G A T G C A G T C A C G T A C T G A T C G G T A C A C T G
A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ACAGCCCTGCCTGGCG
--NCACCTGTN-----
 C G T A A G T C C G T A A T C G G T A C A G T C A G T C A C G T A C T G A T G C A G T C A C G T A C T G A T C G G T A C A C T G
A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ACAGCCCTGCCTGGCG
-TACACCTGTC-----
 C G T A A G T C C G T A A T C G G T A C A G T C A G T C A C G T A C T G A T G C A G T C A C G T A C T G A T C G G T A C A C T G
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ACAGCCCTGCCTGGCG
-AACACCTGCT-----
 C G T A A G T C C G T A A T C G G T A C A G T C A G T C A C G T A C T G A T G C A G T C A C G T A C T G A T C G G T A C A C T G
A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T