Information for 3-TCGGGGCTCA (Motif 5)

A G C T A T G C A C T G C T A G A C T G C T A G A G T C A C G T A G T C G C T A
Reverse Opposite:
C G A T A C T G G T C A C T A G A G T C A G T C A G T C G T A C A T C G T C G A
p-value:1e-8
log p-value:-2.053e+01
Information Content per bp:1.847
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif122.3
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets58.7 +/- 25.0bp
Average Position of motif in Background53.5 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCGGGGCTCA-
---NGGATTAN
 A G C T A T G C A C T G C T A G A C T G C T A G A G T C A C G T A G T C G C T A A C G T
A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCGGGGCTCA-
-TGGGGCCCAC
 A G C T A T G C A C T G C T A G A C T G C T A G A G T C A C G T A G T C G C T A A C G T
A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCGGGGCTCA---
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T A G C T A T G C A C T G C T A G A C T G C T A G A G T C A C G T A G T C G C T A A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCGGGGCTCA-----
NTNNNGGGGTCANGNNN
 A C G T A C G T A G C T A T G C A C T G C T A G A C T G C T A G A G T C A C G T A G T C G C T A A C G T A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCGGGGCTCA-----
CTCCAGGGGTCAATTGA
 A C G T A C G T A G C T A T G C A C T G C T A G A C T G C T A G A G T C A C G T A G T C G C T A A C G T A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PH0165.1_Six6_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCGGGGCTCA-----
AATAGGGTATCAATTAT
 A C G T A C G T A G C T A T G C A C T G C T A G A C T G C T A G A G T C A C G T A G T C G C T A A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCGGGGCTCA
NRRGGGTCTT-
 A C G T A G C T A T G C A C T G C T A G A C T G C T A G A G T C A C G T A G T C G C T A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCGGGGCTCA
--AGRGGTCA
 A G C T A T G C A C T G C T A G A C T G C T A G A G T C A C G T A G T C G C T A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

ZBTB7B/MA0694.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCGGGGCTCA-
TTCGGTGGTCGC
 A C G T A G C T A T G C A C T G C T A G A C T G C T A G A G T C A C G T A G T C G C T A A C G T
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCGGGGCTCA-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A G C T A T G C A C T G C T A G A C T G C T A G A G T C A C G T A G T C G C T A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C