Information for 8-CCTKRCWASTYTRCMA (Motif 16)

A G T C A G T C A G C T A C T G T C A G A G T C C G A T G T C A A T C G A C G T A G C T A C G T C T G A A G T C G T C A C T G A
Reverse Opposite:
A G C T A C G T A C T G A G C T C G T A T C G A C G T A A T G C A C G T C G T A A C T G A G T C G T A C C T G A A C T G A C T G
p-value:1e-6
log p-value:-1.472e+01
Information Content per bp:1.826
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.4 +/- 27.3bp
Average Position of motif in Background48.4 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CCTKRCWASTYTRCMA---
----ANATTTTTGCAANTN
 A G T C A G T C A G C T A C T G T C A G A G T C C G A T G T C A A T C G A C G T A G C T A C G T C T G A A G T C G T C A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:2
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCTKRCWASTYTRCMA
ACCGTGACTAATTNN---
 A C G T A C G T A G T C A G T C A G C T A C T G T C A G A G T C C G A T G T C A A T C G A C G T A G C T A C G T C T G A A G T C G T C A C T G A
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCTKRCWASTYTRCMA
CNNNGCTACTGTANNN
 A G T C A G T C A G C T A C T G T C A G A G T C C G A T G T C A A T C G A C G T A G C T A C G T C T G A A G T C G T C A C T G A
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCTKRCWASTYTRCMA
SCCTAGCAACAG-----
 A C G T A G T C A G T C A G C T A C T G T C A G A G T C C G A T G T C A A T C G A C G T A G C T A C G T C T G A A G T C G T C A C T G A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CCTKRCWASTYTRCMA
CCTTGCAATTTTTNN-
 A G T C A G T C A G C T A C T G T C A G A G T C C G A T G T C A A T C G A C G T A G C T A C G T C T G A A G T C G T C A C T G A
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:6
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CCTKRCWASTYTRCMA
TTTTACGACTTTCCAT
 A G T C A G T C A G C T A C T G T C A G A G T C C G A T G T C A A T C G A C G T A G C T A C G T C T G A A G T C G T C A C T G A
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CCTKRCWASTYTRCMA
GCTGTCAA--------
 A G T C A G T C A G C T A C T G T C A G A G T C C G A T G T C A A T C G A C G T A G C T A C G T C T G A A G T C G T C A C T G A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.47
Offset:-5
Orientation:forward strand
Alignment:-----CCTKRCWASTYTRCMA
GTTGCCATGGCAAC-------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C T G T C A G A G T C C G A T G T C A A T C G A C G T A G C T A C G T C T G A A G T C G T C A C T G A
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:9
Score:0.47
Offset:-5
Orientation:forward strand
Alignment:-----CCTKRCWASTYTRCMA
TGTTKCCTAGCAACM------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C T G T C A G A G T C C G A T G T C A A T C G A C G T A G C T A C G T C T G A A G T C G T C A C T G A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---CCTKRCWASTYTRCMA
TACCATAGCAACGGT----
 A C G T A C G T A C G T A G T C A G T C A G C T A C T G T C A G A G T C C G A T G T C A A T C G A C G T A G C T A C G T C T G A A G T C G T C A C T G A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T A C G T A C G T