Information for 1-CGGCTTTTTGCCC (Motif 1)

A G T C C A T G C T A G T A G C A C G T A G C T A C G T A G C T A G C T T A C G G T A C A G T C G A T C
Reverse Opposite:
C A T G C T A G A C T G A G T C C T G A T C G A C G T A C T G A C G T A A C T G A G T C G A T C A C T G
p-value:1e-25
log p-value:-5.790e+01
Information Content per bp:1.780
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.74%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 23.8bp
Average Position of motif in Background29.1 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.89
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPI1/MA0080.4/Jaspar

Match Rank:1
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCTTTTTGCCC
TACTTCCGCTTTTT----
 A C G T A C G T A C G T A C G T A C G T A G T C C A T G C T A G T A G C A C G T A G C T A C G T A G C T A G C T T A C G G T A C A G T C G A T C
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGGCTTTTTGCCC----
--WCATTTTGKCCTCYT
 A G T C C A T G C T A G T A G C A C G T A G C T A C G T A G C T A G C T T A C G G T A C A G T C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGGCTTTTTGCCC
--YCTTTGTTCC-
 A G T C C A T G C T A G T A G C A C G T A G C T A C G T A G C T A G C T T A C G G T A C A G T C G A T C
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Rarg/MA0859.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTTTTTGCCC--
TTGACCTTTTGACCTT
 A C G T A G T C C A T G C T A G T A G C A C G T A G C T A C G T A G C T A G C T T A C G G T A C A G T C G A T C A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Rarb/MA0857.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGGCTTTTTGCCC---
TGACCTTTTGACCTTT
 A G T C C A T G C T A G T A G C A C G T A G C T A C G T A G C T A G C T T A C G G T A C A G T C G A T C A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGGCTTTTTGCCC
CAGCTGTT-----
 A G T C C A T G C T A G T A G C A C G T A G C T A C G T A G C T A G C T T A C G G T A C A G T C G A T C
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CGGCTTTTTGCCC-
----TRTTTACTTW
 A G T C C A T G C T A G T A G C A C G T A G C T A C G T A G C T A G C T T A C G G T A C A G T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CGGCTTTTTGCCC------
--NSTGTTTRCWCAGBNNN
 A G T C C A T G C T A G T A G C A C G T A G C T A C G T A G C T A G C T T A C G G T A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0136.1_IRC900814_2/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCTTTTTGCCC
TTTTACGACTTTCCAT--
 A C G T A C G T A C G T A C G T A C G T A G T C C A T G C T A G T A G C A C G T A G C T A C G T A G C T A G C T T A C G G T A C A G T C G A T C
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T A C G T A C G T

MSC/MA0665.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGGCTTTTTGCCC
AACAGCTGTT-----
 A C G T A C G T A G T C C A T G C T A G T A G C A C G T A G C T A C G T A G C T A G C T T A C G G T A C A G T C G A T C
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T