Information for 7-GGCCAGCTGG (Motif 10)

A T C G T A C G T A G C G T A C C T G A A C T G A T G C G A C T A T C G A T C G
Reverse Opposite:
T A G C T A G C C T G A T A C G T G A C G A C T C A T G A T C G A T G C T A G C
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.686
Number of Target Sequences with motif182.0
Percentage of Target Sequences with motif20.40%
Number of Background Sequences with motif6262.0
Percentage of Background Sequences with motif12.96%
Average Position of motif in Targets52.2 +/- 28.2bp
Average Position of motif in Background50.1 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GGCCAGCTGG-
VNAVCAGCTGGC
 A C G T A T C G T A C G T A G C G T A C C T G A A C T G A T G C G A C T A T C G A T C G A C G T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GGCCAGCTGG--
--CCAGCTGTTN
 A T C G T A C G T A G C G T A C C T G A A C T G A T G C G A C T A T C G A T C G A C G T A C G T
A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGCCAGCTGG-
NNVVCAGCTGBN
 A C G T A T C G T A C G T A G C G T A C C T G A A C T G A T G C G A C T A T C G A T C G A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GGCCAGCTGG--
--HCAGCTGDTN
 A T C G T A C G T A G C G T A C C T G A A C T G A T G C G A C T A T C G A T C G A C G T A C G T
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:5
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GGCCAGCTGG--
--VCAGCTGBNN
 A T C G T A C G T A G C G T A C C T G A A C T G A T G C G A C T A T C G A T C G A C G T A C G T
A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GGCCAGCTGG--
--NCAGCTGCTG
 A T C G T A C G T A G C G T A C C T G A A C T G A T G C G A C T A T C G A T C G A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGCCAGCTGG-
-GCCATCTGTT
 A T C G T A C G T A G C G T A C C T G A A C T G A T G C G A C T A T C G A T C G A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGCCAGCTGG--
-GACAGCTGCAG
 A T C G T A C G T A G C G T A C C T G A A C T G A T G C G A C T A T C G A T C G A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGCCAGCTGG-
---CAGCTGNT
 A T C G T A C G T A G C G T A C C T G A A C T G A T G C G A C T A T C G A T C G A C G T
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGCCAGCTGG-
NGNGACAGCTGCN
 A C G T A C G T A T C G T A C G T A G C G T A C C T G A A C T G A T G C G A C T A T C G A T C G A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A