Information for 14-GATCACAATGGGAGAG (Motif 21)

A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C T G A C G T A C T G C G T A A C G T A G T C
p-value:1e-4
log p-value:-1.029e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.7 +/- 27.6bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GATCACAATGGGAGAG
NNTNNACAATGGGANNN
 A C G T A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GATCACAATGGGAGAG
---AACAAAGG-----
 A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GATCACAATGGGAGAG
-VRAACAATGG-----
 A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GATCACAATGGGAGAG
---GACAATGNN----
 A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GATCACAATGGGAGAG
---RACAAWGG-----
 A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GATCACAATGGGAGAG
CTCACACAATGGCGC--
 A C G T A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GATCACAATGGGAGAG
-RNAACAATGG-----
 A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G
A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GATCACAATGGGAGAG
--GAACAATGGN----
 A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G
A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GATCACAATGGGAGAG
-VRRACAAWGG-----
 A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GATCACAATGGGAGAG
--GAACAATGG-----
 A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G
A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T