Information for 1-CGCGGCTTTTTGC (Motif 1)

A G T C T A C G A G T C C T A G C T A G A G T C A C G T A C G T A C G T A G C T A G C T T C A G T A G C
Reverse Opposite:
A C T G A G T C C T G A C T G A C G T A C G T A C G T A A C T G A G T C A G T C C T A G A G T C A C T G
p-value:1e-18
log p-value:-4.213e+01
Information Content per bp:1.897
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 22.3bp
Average Position of motif in Background39.5 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)2.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGCTTTTTGC
GGNGCGNCTGTTNNN
 A C G T A C G T A G T C T A C G A G T C C T A G C T A G A G T C A C G T A C G T A C G T A G C T A G C T T C A G T A G C
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGCGGCTTTTTGC
NTCGCGCGCCTTNNN--
 A C G T A C G T A C G T A C G T A G T C T A C G A G T C C T A G C T A G A G T C A C G T A C G T A C G T A G C T A G C T T C A G T A G C
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGCGGCTTTTTGC
ANCGCGCGCCCTTNN--
 A C G T A C G T A C G T A C G T A G T C T A C G A G T C C T A G C T A G A G T C A C G T A C G T A C G T A G C T A G C T T C A G T A G C
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGCGGCTTTTTGC-----
---ANATTTTTGCAANTN
 A G T C T A C G A G T C C T A G C T A G A G T C A C G T A C G T A C G T A G C T A G C T T C A G T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

KLF13/MA0657.1/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CGCGGCTTTTTGC
ATGCCACGCCCCTTTTTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G A G T C C T A G C T A G A G T C A C G T A C G T A C G T A G C T A G C T T C A G T A G C
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G A C G T

E2F2/MA0864.1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CGCGGCTTTTTGC
AAAATGGCGCCATTTT--
 A C G T A C G T A C G T A C G T A C G T A G T C T A C G A G T C C T A G C T A G A G T C A C G T A C G T A C G T A G C T A G C T T C A G T A G C
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CGCGGCTTTTTGC
AAAAATGGCGCCATTTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G A G T C C T A G C T A G A G T C A C G T A C G T A C G T A G C T A G C T T C A G T A G C
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGCTTTTTGC
NNGCACCTTTCTCC
 A C G T A G T C T A C G A G T C C T A G C T A G A G T C A C G T A C G T A C G T A G C T A G C T T C A G T A G C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CGCGGCTTTTTGC-
----YCTTTGTTCC
 A G T C T A C G A G T C C T A G C T A G A G T C A C G T A C G T A C G T A G C T A G C T T C A G T A G C A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CGCGGCTTTTTGC
-----CTGTTTAC
 A G T C T A C G A G T C C T A G C T A G A G T C A C G T A C G T A C G T A G C T A G C T T C A G T A G C
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C