p-value: | 1e-6 |
log p-value: | -1.564e+01 |
Information Content per bp: | 1.752 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 1.94% |
Number of Background Sequences with motif | 68.9 |
Percentage of Background Sequences with motif | 0.14% |
Average Position of motif in Targets | 44.8 +/- 23.2bp |
Average Position of motif in Background | 52.5 +/- 22.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.25 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGATTACTAGMGG NGGGATTA------- |
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GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGATTACTAGMGG RGGATTAR------ |
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Pitx1/MA0682.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGATTACTAGMGG GGGATTAA------ |
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PITX3/MA0714.1/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGATTACTAGMGG GGGATTANN----- |
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OTX1/MA0711.1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGATTACTAGMGG CGGATTAN------ |
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OTX2/MA0712.1/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGATTACTAGMGG NGGATTAA------ |
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Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGATTACTAGMGG VRGGATTARN----- |
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GSC/MA0648.1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGATTACTAGMGG NNGGATTAGN----- |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGATTACTAGMGG GGATTAGC----- |
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GSC2/MA0891.1/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGATTACTAGMGG GNGGATTAGN----- |
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