Information for 3-CCCTCACACTCAC (Motif 4)

A T G C T A G C T A G C C G A T T A G C G C T A A T G C C T G A A G T C C G A T A T G C T C G A A T G C
Reverse Opposite:
A T C G A G C T A T C G C G T A A C T G A G C T A T C G C G A T A T C G G C T A A T C G A T C G A T C G
p-value:1e-11
log p-value:-2.546e+01
Information Content per bp:1.769
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif88.3
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets42.4 +/- 22.8bp
Average Position of motif in Background45.8 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCCTCACACTCAC
GSCTGTCACTCA-
 A T G C T A G C T A G C C G A T T A G C G C T A A T G C C T G A A G T C C G A T A T G C T C G A A T G C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCCTCACACTCAC
--CRCCCACGCA-
 A T G C T A G C T A G C C G A T T A G C G C T A A T G C C T G A A G T C C G A T A T G C T C G A A T G C
A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCCTCACACTCAC
-NCTGTCAATCAN
 A T G C T A G C T A G C C G A T T A G C G C T A A T G C C T G A A G T C C G A T A T G C T C G A A T G C
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCTCACACTCAC
YCCGCCCACGCN-
 A T G C T A G C T A G C C G A T T A G C G C T A A T G C C T G A A G T C C G A T A T G C T C G A A T G C
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCTCACACTCAC
AGCGGCACACACGCAA
 A C G T A C G T A C G T A T G C T A G C T A G C C G A T T A G C G C T A A T G C C T G A A G T C C G A T A T G C T C G A A T G C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCTCACACTCAC
-SCTGTCAVTCAV
 A T G C T A G C T A G C C G A T T A G C G C T A A T G C C T G A A G T C C G A T A T G C T C G A A T G C
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCTCACACTCAC
CCCCCGCCCCCGCC-
 A C G T A C G T A T G C T A G C T A G C C G A T T A G C G C T A A T G C C T G A A G T C C G A T A T G C T C G A A T G C
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCCTCACACTCAC
-GGACACACCCCC
 A T G C T A G C T A G C C G A T T A G C G C T A A T G C C T G A A G T C C G A T A T G C T C G A A T G C
A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCCTCACACTCAC
---TCACACCT--
 A T G C T A G C T A G C C G A T T A G C G C T A A T G C C T G A A G T C C G A T A T G C T C G A A T G C
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCCTCACACTCAC-
TCCGCCCCCGCATT
 A T G C T A G C T A G C C G A T T A G C G C T A A T G C C T G A A G T C C G A T A T G C T C G A A T G C A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T