Information for 2-CCAACCCAGCCGC (Motif 3)

A G T C A T G C C G T A C G T A A G T C A G T C A G T C C G T A A C T G A G T C A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C T G A G T C A C G T A C T G A C T G A C T G C G A T G A C T A T C G C T A G
p-value:1e-12
log p-value:-2.820e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 23.8bp
Average Position of motif in Background74.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCAACCCAGCCGC-
----CGCAGCTGCG
 A G T C A T G C C G T A C G T A A G T C A G T C A G T C C G T A A C T G A G T C A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCAACCCAGCCGC
TCCCAGMCRAGCCCC
 A C G T A C G T A G T C A T G C C G T A C G T A A G T C A G T C A G T C C G T A A C T G A G T C A G T C A C T G A G T C
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

RREB1/MA0073.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCAACCCAGCCGC-----
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A G T C A T G C C G T A C G T A A G T C A G T C A G T C C G T A A C T G A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCAACCCAGCCGC---
-AGCAACAGCCGCACC
 A G T C A T G C C G T A C G T A A G T C A G T C A G T C C G T A A C T G A G T C A G T C A C T G A G T C A C G T A C G T A C G T
A C G T T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCAACCCAGCCGC--
-----NCAGCTGCTG
 A G T C A T G C C G T A C G T A A G T C A G T C A G T C C G T A A C T G A G T C A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCAACCCAGCCGC
---NNACAGCTGC
 A G T C A T G C C G T A C G T A A G T C A G T C A G T C C G T A A C T G A G T C A G T C A C T G A G T C
A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCAACCCAGCCGC-
--NNVVCAGCTGBN
 A G T C A T G C C G T A C G T A A G T C A G T C A G T C C G T A A C T G A G T C A G T C A C T G A G T C A C G T
A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCAACCCAGCCGC-
------CAGCTGNT
 A G T C A T G C C G T A C G T A A G T C A G T C A G T C C G T A A C T G A G T C A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCAACCCAGCCGC--
-----CCAGCTGTTN
 A G T C A T G C C G T A C G T A A G T C A G T C A G T C C G T A A C T G A G T C A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCAACCCAGCCGC
--TGCCCAGNHW-
 A G T C A T G C C G T A C G T A A G T C A G T C A G T C C G T A A C T G A G T C A G T C A C T G A G T C
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T