Information for 12-CCCCAGTCAGGCT (Motif 24)

A G T C A T G C A G T C A T G C C G T A A C T G A C G T A G T C C G T A A C T G C T A G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C C G A T A C T G C G T A A G T C A C G T A T C G A C T G A T C G A C T G
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.932
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets75.0 +/- 7.9bp
Average Position of motif in Background33.5 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCCCAGTCAGGCT--
TCCCAGMCRAGCCCC
 A G T C A T G C A G T C A T G C C G T A A C T G A C G T A G T C C G T A A C T G C T A G A G T C A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCCCAGTCAGGCT
CGCCCCCTGACA----
 A C G T A C G T A C G T A G T C A T G C A G T C A T G C C G T A A C T G A C G T A G T C C G T A A C T G C T A G A G T C A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCCAGTCAGGCT----
--SCAGYCADGCATGAC
 A G T C A T G C A G T C A T G C C G T A A C T G A C G T A G T C C G T A A C T G C T A G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCCAGTCAGGCT
--CCAGACAG---
 A G T C A T G C A G T C A T G C C G T A A C T G A C G T A G T C C G T A A C T G C T A G A G T C A C G T
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCCCAGTCAGGCT
TGCCCAGNHW----
 A C G T A G T C A T G C A G T C A T G C C G T A A C T G A C G T A G T C C G T A A C T G C T A G A G T C A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCCCAGTCAGGCT
----AGTCACGC-
 A G T C A T G C A G T C A T G C C G T A A C T G A C G T A G T C C G T A A C T G C T A G A G T C A C G T
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCCCAGTCAGGCT---
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A C G T A C G T A G T C A T G C A G T C A T G C C G T A A C T G A C G T A G T C C G T A A C T G C T A G A G T C A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCCCAGTCAGGCT
--CCAGACRSVB-
 A G T C A T G C A G T C A T G C C G T A A C T G A C G T A G T C C G T A A C T G C T A G A G T C A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

NFYB/MA0502.1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCCCAGTCAGGCT
AAATGGACCAATCAG---
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G T C A T G C C G T A A C T G A C G T A G T C C G T A A C T G C T A G A G T C A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGTCAGGCT
AGCCTCAGGCA----
 A C G T A C G T A G T C A T G C A G T C A T G C C G T A A C T G A C G T A G T C C G T A A C T G C T A G A G T C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T