Information for 1-CGCCATCATG (Motif 1)

A G T C T A C G A T G C A G T C T C G A G A C T T A G C C G T A A G C T A T C G
Reverse Opposite:
T A G C T C G A G C A T A T C G C T G A A G C T T C A G T A C G A T G C T C A G
p-value:1e-19
log p-value:-4.458e+01
Information Content per bp:1.595
Number of Target Sequences with motif155.0
Percentage of Target Sequences with motif16.28%
Number of Background Sequences with motif3479.2
Percentage of Background Sequences with motif7.41%
Average Position of motif in Targets49.7 +/- 27.4bp
Average Position of motif in Background50.1 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATCATG
GCCGCCATCTTG
 A C G T A C G T A G T C T A C G A T G C A G T C T C G A G A C T T A G C C G T A A G C T A T C G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CGCCATCATG
GTCCGCCATTA--
 A C G T A C G T A C G T A G T C T A C G A T G C A G T C T C G A G A C T T A G C C G T A A G C T A T C G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CGCCATCATG
GCNGCCATCTTG
 A C G T A C G T A G T C T A C G A T G C A G T C T C G A G A C T T A G C C G T A A G C T A T C G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------CGCCATCATG
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G A T G C A G T C T C G A G A C T T A G C C G T A A G C T A T C G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CGCCATCATG
AGCGCGCC------
 A C G T A C G T A C G T A C G T A G T C T A C G A T G C A G T C T C G A G A C T T A G C C G T A A G C T A T C G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------CGCCATCATG
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G A T G C A G T C T C G A G A C T T A G C C G T A A G C T A T C G
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

Atf3/MA0605.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGCCATCATG
ACGTCATC---
 A C G T A G T C T A C G A T G C A G T C T C G A G A C T T A G C C G T A A G C T A T C G
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CGCCATCATG
ANCGCGCGCCCTTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G A T G C A G T C T C G A G A C T T A G C C G T A A G C T A T C G
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CGCCATCATG--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A C G T A G T C T A C G A T G C A G T C T C G A G A C T T A G C C G T A A G C T A T C G A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CGCCATCATG
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G A T G C A G T C T C G A G A C T T A G C C G T A A G C T A T C G
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C